Tableau information
Concept source: d2ehha_ amino acid (a.a.) range (GLY4)(LYS64)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY4) (LEU9) E1
(TYR20) (ASP32) H2
(ASP36) (CYS41) E3
(GLU46) (LEU50) H4
(THR51) (LYS64) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 163.4° H2
E3 -32.9° 155.9° E3
H4 56.6° -137.6° -54.1° H4
H5 134.5° -40.8° 162.5° 110.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2nv2c_ : (VAL207) (THR256) [view usage] : c.1.2.6 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |PdxS-like |automated matches |Bacillus subtilis [TaxId: 1423]
d2b7la_ : (LYS2) (ILE62) [view usage] : c.26.1.2 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Cytidylyltransferase |automated matches |Staphylococcus aureus [TaxId: 1280]
d1fo1a1 : (LYS294) (GLU343) [view usage] : c.10.2.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |mRNA export factor tap |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]
d1vsqc_ : (TYR161) (ALA212) [view usage] : c.38.1.0 |PTS IIb component |PTS IIb component |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1ztva_ : (MET1) (ALA54) [view usage] : c.1.32.1 |TIM beta/alpha-barrel |TM1631-like |TM1631-like |automated matches |Enterococcus faecalis [TaxId: 226185]
d1fcua_ : (GLU50) (MET165) [view usage] : c.1.8.9 |TIM beta/alpha-barrel |(Trans)glycosidases |Bee venom hyaluronidase |Bee venom hyaluronidase |Honeybee (Apis mellifera) [TaxId: 7460]
d3pb0a_ : (GLY4) (ASP67) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Thermotoga maritima [TaxId: 2336]
d1dkwa_ : (GLN5) (ARG54) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d4hcda2 : (ILE252) (GLY303) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d1fo1b_ : (LYS294) (PHE345) [view usage] : c.10.2.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |mRNA export factor tap |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]
d1nz0b_ : (ARG45) (ILE115) [view usage] : d.14.1.2 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |RNase P protein |RNase P protein |Thermotoga maritima [TaxId: 2336]
d4awua_ : (VAL295) (HIS337) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Shewanella oneidensis [TaxId: 211586]
d1m8ka_ : (THR3) (GLY67) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Nicotinamide mononucleotide (NMN) adenylyltransferase |Methanobacterium thermoautotrophicum [TaxId: 145262]
d2b7lb_ : (LYS502) (ILE562) [view usage] : c.26.1.2 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Cytidylyltransferase |automated matches |Staphylococcus aureus [TaxId: 1280]
d2dzvb_ : (LEU7) (ARG76) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Trp synthase alpha-subunit |Pyrococcus furiosus [TaxId: 2261]
d2cffa_ : (ILE76) (ASP119) [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |Phosphoribosylformimino-5-aminoimidazole carboxamide ribotite isomerase HisA |Thermotoga maritima [TaxId: 2336]
d2cffa_ : (LYS190) (ARG241) [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |Phosphoribosylformimino-5-aminoimidazole carboxamide ribotite isomerase HisA |Thermotoga maritima [TaxId: 2336]
d1dosa_ : (ASN28) (GLY101) [view usage] : c.1.10.2 |TIM beta/alpha-barrel |Aldolase |Class II FBP aldolase |Fructose-bisphosphate aldolase (FBP aldolase) |Escherichia coli [TaxId: 562]
d1vhna_ : (VAL5) (LEU53) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Putative flavin oxidoreducatase TM0096 |Thermotoga maritima [TaxId: 2336]
d4jdya_ : (THR213) (THR261) [view usage] : c.1.2.6 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |PdxS-like |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d3vupa_ : (PRO288) (ILE338) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Aplysia kurodai [TaxId: 6501]
d4jg4a_ : (GLU43) (SER111) [view usage] : d.14.1.0 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2nuwa_ : (MET1) (TYR62) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Sulfolobus acidocaldarius [TaxId: 330779]
d2ehha_ : (GLY4) (LYS64) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
d1a8ha2 : (LYS3) (GLY86) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Methionyl-tRNA synthetase (MetRS) |Thermus thermophilus [TaxId: 274]
d1lw7a1 : (LYS58) (PHE125) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Transcriptional regulator NadR, NMN-adenylyltransferase domain |Haemophilus influenzae [TaxId: 727]
d1nz0d_ : (ARG45) (ILE115) [view usage] : d.14.1.2 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |RNase P protein |RNase P protein |Thermotoga maritima [TaxId: 2336]
d1be1a_ : (PHE32) (GLU80) [view usage] : c.23.6.1 |Flavodoxin-like |Cobalamin (vitamin B12)-binding domain |Cobalamin (vitamin B12)-binding domain |Glutamate mutase, small subunit |Clostridium tetanomorphum [TaxId: 1553]
d4jjza_ : (THR266) (GLY322) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |automated matches |Moorella thermoacetica [TaxId: 1525]
d1vysx_ : (GLY295) (LYS338) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Pentaerythritol tetranirate reductase |Enterobacter cloacae [TaxId: 550]
d2oogd_ : (ARG53) (GLN126) [view usage] : c.1.18.0 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
d3q94a_ : (LYS17) (ASN75) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d1gwja_ : (GLY300) (LEU343) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Morphinone reductase |Pseudomonas putida [TaxId: 303]
d2hzba1 : (ASN5) (LEU64) [view usage] : c.143.1.1 |CofD-like |CofD-like |CofD-like |Hypothetical protein BH3568 |Bacillus halodurans [TaxId: 86665]
d1nz0a_ : (ARG45) (ILE115) [view usage] : d.14.1.2 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |RNase P protein |RNase P protein |Thermotoga maritima [TaxId: 2336]
d2d54a2 : (LYS3) (ARG73) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Thermus thermophilus [TaxId: 274]
d3kfla1 : (PHE211) (ASN292) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Leishmania major [TaxId: 5664]
d2ooga_ : (ARG53) (GLN126) [view usage] : c.1.18.0 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
d1tqxa_ : (ASN175) (LYS223) [view usage] : c.1.2.2 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |D-ribulose-5-phosphate 3-epimerase |D-ribulose-5-phosphate 3-epimerase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1f48a1 : (ARG198) (ASN262) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Arsenite-translocating ATPase ArsA |Escherichia coli [TaxId: 562]
d1woya2 : (LYS3) (GLY86) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Thermus thermophilus [TaxId: 274]
d1rvka1 : (ILE252) (GLY303) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Hypothetical protein Atu3453 |Agrobacterium tumefaciens [TaxId: 358]
d4hgxb_ : (GLY194) (GLN272) [view usage] : c.1.15.4 |TIM beta/alpha-barrel |Xylose isomerase-like |IolI-like |Putative cytoplasmic protein STM4435 |Salmonella typhimurium [TaxId: 90371]
d2jc4a_ : (ARG100) (LEU182) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Neisseria meningitidis [TaxId: 487]
d1xhkb_ : (PRO489) (LEU564) [view usage] : d.14.1.10 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |ATP-dependent protease Lon (La), catalytic domain |ATP-dependent protease Lon (La), catalytic domain |Methanococcus jannaschii [TaxId: 2190]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.10, c.26, c.23, c.37, d.151, d.14, c.38, c.143