Tableau information
Concept source: d1bp5c_ amino acid (a.a.) range (HIS249)(ARG327)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(HIS249) (ARG254) E1
(LYS259) (HIS273) H2
(GLY301) (PRO307) E3
(ASP310) (GLY316) H4
(GLY316) (ARG327) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 149.5° H2
E3 -41.0° -162.0° E3
H4 158.9° -48.1° 118.5° H4
H5 -79.6° 107.2° -88.0° 108.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2haua1 : (ASN584) (ARG663) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d1v5ea1 : (ASP295) (GLU359) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Pyruvate oxidase |Aerococcus viridans [TaxId: 1377]
d4em6c_ : (HIS237) (ALA305) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Brucella melitensis [TaxId: 224914]
d1ovta1 : (ALA251) (LYS333) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Ovotransferrin |Chicken (Gallus gallus) [TaxId: 9031]
d1aiva1 : (ALA251) (ARG332) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Ovotransferrin |Chicken (Gallus gallus) [TaxId: 9031]
d1upba1 : (LYS314) (ASP374) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Carboxyethylarginine synthase |Streptomyces clavuligerus [TaxId: 1901]
d1dtza1 : (SER252) (GLU333) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Camel (Camelus dromedarius) [TaxId: 9838]
d1bnla_ : (PRO8) (ALA68) [view usage] : d.169.1.5 |C-type lectin-like |C-type lectin-like |Endostatin |Endostatin |Human (Homo sapiens) [TaxId: 9606]
d1dy1a_ : (VAL140) (SER199) [view usage] : d.169.1.5 |C-type lectin-like |C-type lectin-like |Endostatin |Endostatin |Mouse (Mus musculus) [TaxId: 10090]
d1lu9a2 : (LYS4) (THR61) [view usage] : c.58.1.4 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Methylene-tetrahydromethanopterin dehydrogenase |Methylene-tetrahydromethanopterin dehydrogenase |Methylobacterium extorquens [TaxId: 408]
d1n76a1 : (ARG249) (LYS333) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1h76a1 : (ALA248) (GLU333) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Pig (Sus scrofa) [TaxId: 9823]
d2wu8a_ : (HIS241) (ALA307) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1btja_ : (SER248) (ARG327) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d1fcka1 : (VAL255) (LYS333) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1jcga2 : (GLY280) (LEU332) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Prokaryotic actin homolog MreB |Thermotoga maritima [TaxId: 2336]
d1bkaa1 : (SER252) (LEU331) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1bp5c_ : (HIS249) (ARG327) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d3qyta1 : (SER248) (ARG327) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1upaa1 : (LYS314) (ASP374) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Carboxyethylarginine synthase |Streptomyces clavuligerus [TaxId: 1901]
d1t9dc1 : (GLY402) (GLU457) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Acetohydroxyacid synthase catalytic subunit |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1powa1 : (ARG300) (ASP365) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Pyruvate oxidase |Lactobacillus plantarum [TaxId: 1590]
d1koea_ : (VAL140) (SER199) [view usage] : d.169.1.5 |C-type lectin-like |C-type lectin-like |Endostatin |Endostatin |Mouse (Mus musculus) [TaxId: 10090]
d3aala_ : (LYS211) (ALA296) [view usage] : c.1.15.1 |TIM beta/alpha-barrel |Xylose isomerase-like |Endonuclease IV |automated matches |Geobacillus kaustophilus [TaxId: 1462]
d1l5ta_ : (SER252) (ARG332) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1dy0a_ : (VAL140) (SER199) [view usage] : d.169.1.5 |C-type lectin-like |C-type lectin-like |Endostatin |Endostatin |Mouse (Mus musculus) [TaxId: 10090]
d1jcea2 : (GLY280) (LEU332) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Prokaryotic actin homolog MreB |Thermotoga maritima [TaxId: 2336]
d1cb6a1 : (SER1252) (LYS1333) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d2c31a1 : (LYS301) (ALA368) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Oxalyl-CoA decarboxylase |Oxalobacter formigenes [TaxId: 847]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.94, c.80, c.55, d.169, c.31, c.58