Protein Concepts Dictionary

Tableau information

Concept source:  d1qk0a_  amino acid (a.a.) range (ALA345)(ALA442)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA345)  (GLN351) E1
	  (GLN363)  (ASN369) H2
	  (GLY372)  (ARG378) E3
	  (LEU417)  (ALA420) H4
	  (GLN432)  (ALA442) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2       66.8°   H2                          
E3     -134.1°  -81.0°   E3                   
H4       50.8°  -35.0°  -84.1°   H4            
H5      103.0° -116.7°  -62.7°   88.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ocja_ :   (GLY346)  (ALA446)   [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Humicola insolens, Cel6a [TaxId: 34413]
 d1gz1a_ :   (GLY346)  (ASN445)   [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Humicola insolens, Cel6a [TaxId: 34413]
 d3a64a_ :   (GLY286)  (ILE373)   [view usage] : c.6.1.0 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |automated matches |automated matches |Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]
 d3a9ba_ :   (GLY286)  (ILE373)   [view usage] : c.6.1.0 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |automated matches |automated matches |Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]
 d4i5ra_ :   (GLY342)  (ALA442)   [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |automated matches |Fungus (Humicola insolens) [TaxId: 34413]
 d3abxa_ :   (GLY286)  (ILE373)   [view usage] : c.6.1.0 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |automated matches |automated matches |Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]
 d1hgya_ :   (ALA345)  (ALA442)   [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Trichoderma reesei, Cel6a [TaxId: 51453]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.6