Protein Concepts Dictionary

Tableau information

Concept source:  d3hjwa2  amino acid (a.a.) range (PRO254)(PRO334)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO254)  (LYS259) E1
	  (LYS259)  (GLY269) H2
	  (LEU289)  (THR294) E3
	  (THR308)  (GLU314) H4
	  (PRO329)  (PRO334) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2     -114.6°   H2                          
E3      -27.2° -128.4°   E3                   
H4       15.8°  124.1°  -34.1°   H4            
H5      -44.7° -153.2°   43.9°  -31.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3mqka2 :   (PRO254)  (PRO334)   [view usage] : b.122.1.0 |PUA domain-like |PUA domain-like |automated matches |automated matches |Pyrococcus furiosus [TaxId: 2261]
 d2ausa2 :   (PRO251)  (PRO331)   [view usage] : b.122.1.0 |PUA domain-like |PUA domain-like |automated matches |automated matches |Pyrococcus abyssi [TaxId: 29292]
 d2ey4a1 :   (PRO254)  (PRO334)   [view usage] : b.122.1.1 |PUA domain-like |PUA domain-like |PUA domain |Pseudouridine synthase II TruB, C-terminal domain |Pyrococcus furiosus [TaxId: 2261]
 d3hjwa2 :   (PRO254)  (PRO334)   [view usage] : b.122.1.0 |PUA domain-like |PUA domain-like |automated matches |automated matches |Pyrococcus furiosus [TaxId: 2261]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 b.122