Tableau information
Concept source: d4kwib_ amino acid (a.a.) range (GLY139)(SER233)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY139) (VAL145) E1
(VAL158) (LEU178) H2
(ARG182) (GLY191) E3
(ILE202) (LEU212) H4
(PRO221) (SER233) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -167.2° H2
E3 -21.0° -158.7° E3
H4 124.7° -43.7° 119.8° H4
H5 153.5° 19.1° 166.6° 48.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2r5nb3 : (GLU551) (VAL600) [view usage] : c.48.1.1 |TK C-terminal domain-like |TK C-terminal domain-like |Transketolase C-terminal domain-like |Transketolase (TK), C-domain |Escherichia coli [TaxId: 562]
d2r5nb3 : (ALA607) (LEU663) [view usage] : c.48.1.1 |TK C-terminal domain-like |TK C-terminal domain-like |Transketolase C-terminal domain-like |Transketolase (TK), C-domain |Escherichia coli [TaxId: 562]
d3dc7a1 : (PRO131) (SER222) [view usage] : c.23.10.9 |Flavodoxin-like |SGNH hydrolase |BT2961-like |Uncharacterized protein Lp3323 |Lactobacillus plantarum [TaxId: 1590]
d2ckra_ : (PRO350) (SER430) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Thermobifida fusca [TaxId: 2021]
d4rk0d_ : (GLN189) (THR239) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
d2zkia_ : (CYS3) (ALA71) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
d2d81a1 : (SER242) (VAL334) [view usage] : c.69.1.37 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |PHB depolymerase-like |Polyhydroxybutyrate depolymerase |Penicillium funiculosum [TaxId: 28572]
d2zkie_ : (MET1) (ALA71) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
d2bd0a1 : (GLY138) (GLN223) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Bacterial sepiapterin reductase |Chlorobium tepidum [TaxId: 1097]
d4cf6b_ : (ARG4) (GLU93) [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2d80a1 : (SER242) (VAL334) [view usage] : c.69.1.37 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |PHB depolymerase-like |Polyhydroxybutyrate depolymerase |Penicillium funiculosum [TaxId: 28572]
d4fs3a_ : (GLY140) (SER235) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Staphylococcus aureus [TaxId: 282458]
d3svlb_ : (LEU5) (ALA73) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2sspe_ : (LEU240) (GLY295) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Human (Homo sapiens) [TaxId: 9606]
d2asea1 : (VAL77) (ASP148) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]
d2r8ob3 : (GLU551) (VAL600) [view usage] : c.48.1.1 |TK C-terminal domain-like |TK C-terminal domain-like |Transketolase C-terminal domain-like |Transketolase (TK), C-domain |Escherichia coli [TaxId: 562]
d2r8ob3 : (ALA607) (HIS667) [view usage] : c.48.1.1 |TK C-terminal domain-like |TK C-terminal domain-like |Transketolase C-terminal domain-like |Transketolase (TK), C-domain |Escherichia coli [TaxId: 562]
d1brwa2 : (ASP194) (GLU284) [view usage] : c.27.1.1 |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Pyrimidine nucleoside phosphorylase |Bacillus stearothermophilus [TaxId: 1422]
d1yuoa_ : (LEU240) (GLY295) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Human (Homo sapiens) [TaxId: 9606]
d2r5na3 : (GLU551) (VAL600) [view usage] : c.48.1.1 |TK C-terminal domain-like |TK C-terminal domain-like |Transketolase C-terminal domain-like |Transketolase (TK), C-domain |Escherichia coli [TaxId: 562]
d2r5na3 : (ALA607) (HIS667) [view usage] : c.48.1.1 |TK C-terminal domain-like |TK C-terminal domain-like |Transketolase C-terminal domain-like |Transketolase (TK), C-domain |Escherichia coli [TaxId: 562]
d1qgda3 : (ALA607) (LEU663) [view usage] : c.48.1.1 |TK C-terminal domain-like |TK C-terminal domain-like |Transketolase C-terminal domain-like |Transketolase (TK), C-domain |Escherichia coli [TaxId: 562]
d1t10a_ : (HIS294) (ILE340) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d13pka_ : (LYS17) (LEU104) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1mfpa_ : (GLY138) (SER234) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Escherichia coli [TaxId: 562]
d3svla_ : (LEU5) (ALA73) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1rtta_ : (ILE7) (ALA73) [view usage] : c.23.5.4 |Flavodoxin-like |Flavoproteins |NADPH-dependent FMN reductase |Hypothetical protein PA1204 |Pseudomonas aeruginosa [TaxId: 287]
d2c7ba_ : (PRO242) (GLN309) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Uncultured archaeon [TaxId: 115547]
d4rk0a_ : (GLU188) (THR239) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
d2cksa_ : (PRO350) (SER430) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Thermobifida fusca [TaxId: 2021]
d2zkid_ : (ASN6) (ALA71) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
d2cksb_ : (PRO350) (SER430) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Thermobifida fusca [TaxId: 2021]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.2, c.80, c.93, c.23, c.37, c.18, c.86, c.48, c.27