Tableau information
Concept source: d3qu7a_ amino acid (a.a.) range (PHE186)(LEU224)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE186) (ASN191) E1
(GLY197) (ALA203) H2
(ASP206) (PRO210) E3
(MET212) (SER218) H4
(SER218) (LEU224) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 163.6° H2
E3 -24.9° 163.0° E3
H4 139.4° -56.9° 121.0° H4
H5 151.8° -28.4° 165.8° -51.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1tmwa_ : (ARG73) (LYS131) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1bqca_ : (GLY218) (GLY287) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-mannanase |Thermobifida fusca [TaxId: 2021]
d2lxxa_ : (ILE93) (GLN150) [view usage] : d.109.1.0 |Gelsolin-like |Actin depolymerizing proteins |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d3bwya_ : (ALA84) (ASP131) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Human (Homo sapiens) [TaxId: 9606]
d1vkka_ : (ARG81) (ARG142) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |Glia maturation factor gamma, GMF-gamma |Mouse (Mus musculus) [TaxId: 10090]
d3f74a_ : (ILE255) (LYS305) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) |Human (Homo sapiens) [TaxId: 9606]
d4lu1a_ : (LYS3) (PRO61) [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2xvza_ : (ALA7) (GLY78) [view usage] : c.92.1.0 |Chelatase-like |Chelatase |automated matches |automated matches |Desulfovibrio vulgaris [TaxId: 882]
d1b3ba2 : (LYS68) (GLN131) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Thermotoga maritima [TaxId: 2336]
d2zyna_ : (ASP19) (GLY72) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermoactinomyces vulgaris [TaxId: 2026]
d4c7va3 : (LYS608) (GLU662) [view usage] : c.48.1.0 |TK C-terminal domain-like |TK C-terminal domain-like |automated matches |automated matches |Lactobacillus salivarius [TaxId: 362948]
d1q57a2 : (LYS151) (GLN198) [view usage] : e.13.1.2 |DNA primase core |DNA primase core |Primase fragment of primase-helicase protein |Primase fragment of primase-helicase protein |Bacteriophage T7 [TaxId: 10760]
d3fpka2 : (LEU137) (GLY199) [view usage] : c.25.1.1 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |Reductases |automated matches |Salmonella typhimurium [TaxId: 99287]
d2cl5a_ : (ALA84) (ASP131) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1j8qa_ : (LYS87) (ALA147) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Desulfovibrio vulgaris [TaxId: 881]
d3jzja_ : (GLY20) (ASN73) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptomyces glaucescens [TaxId: 1907]
d4jhca_ : (LYS3) (PRO61) [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2w0ia_ : (SER252) (HIS313) [view usage] : d.109.1.0 |Gelsolin-like |Actin depolymerizing proteins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3s8ya_ : (PRO215) (ASN278) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Oleispira antarctica [TaxId: 188908]
d1h1da_ : (ALA84) (ASP131) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2ghba_ : (PRO5) (GLY55) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d4jdwa_ : (GLY314) (GLY387) [view usage] : d.126.1.2 |Pentein, beta/alpha-propeller |Pentein |Amidinotransferase |L-arginine: glycine amidinotransferase |Human (Homo sapiens) [TaxId: 9606]
d1nvmc2 : (HIS82) (GLY133) [view usage] : c.1.10.5 |TIM beta/alpha-barrel |Aldolase |HMGL-like |4-hydroxy-2-oxovalerate aldolase DmpG, catalytic domain |Pseudomonas sp. [TaxId: 306]
d1ao3a_ : (ARG134) (CYS187) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A3 domain, vWA3 |Human (Homo sapiens) [TaxId: 9606]
d2oysa_ : (PHE118) (GLY179) [view usage] : c.23.5.5 |Flavodoxin-like |Flavoproteins |Hypothetical protein SP1951 |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d2rbeb_ : (HIS60) (MET110) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |11-beta-hydroxysteroid dehydrogenase 1 |Human (Homo sapiens) [TaxId: 9606]
d4b6ga_ : (GLN211) (LYS275) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Neisseria meningitidis [TaxId: 122586]
d3zqka_ : (ASP1622) (SER1671) [view usage] : c.62.1.0 |vWA-like |vWA-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ho4a_ : (ASP48) (GLY98) [view usage] : c.68.1.6 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |glucose-1-phosphate thymidylyltransferase |RmlA (RfbA) |Aneurinibacillus thermoaerophilus [TaxId: 143495]
d3ls2a_ : (PRO216) (SER279) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Pseudoalteromonas haloplanktis [TaxId: 326442]
d1n2za_ : (GLN210) (VAL265) [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |Vitamin B12 binding protein BtuF |Escherichia coli [TaxId: 562]
d1c2ya_ : (HIS73) (HIS152) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Spinach (Spinacia oleracea) [TaxId: 3562]
d2q6oa1 : (ASN4) (PHE61) [view usage] : c.132.1.0 |Bacterial fluorinating enzyme, N-terminal domain |Bacterial fluorinating enzyme, N-terminal domain |automated matches |automated matches |Salinispora tropica [TaxId: 369723]
d4bgea_ : (LEU36) (GLY83) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
d3i6va_ : (THR52) (GLY109) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 89184]
d2zyka_ : (LYS17) (GLY72) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermoactinomyces vulgaris [TaxId: 2026]
d1fe8a_ : (ARG1056) (CYS1109) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A3 domain, vWA3 |Human (Homo sapiens) [TaxId: 9606]
d1c7ea_ : (LYS87) (ILE148) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Desulfovibrio vulgaris [TaxId: 881]
d1knxa1 : (PRO85) (PHE132) [view usage] : c.98.2.1 |MurF and HprK N-domain-like |HprK N-terminal domain-like |HPr kinase/phoshatase HprK N-terminal domain |HPr kinase/phoshatase HprK N-terminal domain |Mycoplasma pneumoniae [TaxId: 2104]
d3ppwa_ : (ASP1622) (GLY1672) [view usage] : c.62.1.0 |vWA-like |vWA-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2rslb_ : (ARG2) (LYS54) [view usage] : c.53.1.1 |Resolvase-like |Resolvase-like |gamma,delta resolvase, catalytic domain |gamma,delta resolvase, catalytic domain |Escherichia coli [TaxId: 562]
d1tvja_ : (LYS95) (GLY154) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d2o2cc_ : (HIS295) (LEU335) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosoma brucei [TaxId: 5702]
d2o2ca_ : (HIS295) (LEU335) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosoma brucei [TaxId: 5702]
d1k8qa_ : (ALA317) (ASP377) [view usage] : c.69.1.6 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Gastric lipase |Gastric lipase |Dog (Canis familiaris) [TaxId: 9615]
d1mkzb_ : (GLU7) (SER67) [view usage] : c.57.1.1 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |MogA-like |MoaB |Escherichia coli [TaxId: 562]
d3c8nc_ : (PRO171) (ASP219) [view usage] : c.1.16.0 |TIM beta/alpha-barrel |Bacterial luciferase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1fe8c_ : (THR1058) (LYS1107) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A3 domain, vWA3 |Human (Homo sapiens) [TaxId: 9606]
d3gxba_ : (ASP1622) (SER1671) [view usage] : c.62.1.0 |vWA-like |vWA-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1deoa_ : (THR1) (VAL61) [view usage] : c.23.10.4 |Flavodoxin-like |SGNH hydrolase |Rhamnogalacturonan acetylesterase |Rhamnogalacturonan acetylesterase |Fungus (Aspergillus aculeatus) [TaxId: 5053]
d3qvmb_ : (PRO219) (GLN278) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Oleispira antarctica [TaxId: 188908]
d1ay0a3 : (PRO611) (TYR667) [view usage] : c.48.1.1 |TK C-terminal domain-like |TK C-terminal domain-like |Transketolase C-terminal domain-like |Transketolase (TK), C-domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3ppxa_ : (ASP1622) (GLY1672) [view usage] : c.62.1.0 |vWA-like |vWA-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2deca_ : (ARG33) (PRO76) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d1v6fa_ : (CYS93) (GLY145) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |Glia maturation factor beta, GMF-beta |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.94, c.2, c.68, c.108, c.92, c.66, c.80, c.23, c.62, c.57, d.126, c.53, e.13, c.25, c.51, c.16, d.109, c.48,
c.58, c.98, c.132