Protein Concepts Dictionary

Tableau information

Concept source:  d3m7ta_  amino acid (a.a.) range (GLY161)(GLY198)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY161)  (SER165) E1
	  (PRO173)  (ARG177) H2
	  (ARG177)  (GLU182) E3
	  (LEU184)  (GLN190) H4
	  (GLY192)  (GLY198) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2      125.3°   H2                          
E3     -136.1°  -28.9°   E3                   
H4     -117.4°   27.9°   19.0°   H4            
E5       73.3° -148.2° -119.4°  123.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3m7ta_ :   (GLY161)  (GLY198)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |automated matches |Lysobacter enzymogenes [TaxId: 69]
 d1p09a_ :   (GLY216)  (GLY244)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
 d3urca_ :   (GLY216)  (GLY245)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
 d1p01a_ :   (GLY216)  (GLY244)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
 d3urea_ :   (GLY216)  (GLY245)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
 d3urda_ :   (GLY161)  (GLY198)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
 d3m7ua_ :   (GLY161)  (GLY198)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |automated matches |Lysobacter enzymogenes [TaxId: 69]
 d1qq4a_ :   (GLY161)  (GLY198)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47