Protein Concepts Dictionary

Tableau information

Concept source:  d1twjc_  amino acid (a.a.) range (LYS3)(VAL78)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS3)    (SER9) E1
	   (PRO17)   (SER28) H2
	   (GLN35)   (GLU48) E3
	   (ASP53)   (LYS64) H4
	   (GLU72)   (VAL78) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2      -87.7°   H2                          
E3      151.9°  118.8°   E3                   
H4      -42.5°   82.8°  126.5°   H4            
E5      162.4°   81.5°  -43.7°  147.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1vq3b_ :     (PRO2)   (GLU81)   [view usage] : d.284.1.1 |PurS-like |PurS-like |PurS subunit of FGAM synthetase |PurS subunit of FGAM synthetase |Thermotoga maritima [TaxId: 2336]
 d1t3ta3 :    (LYS73)  (SER141)   [view usage] : d.284.1.2 |PurS-like |PurS-like |FGAM synthase PurL, PurS-like domain |FGAM synthase PurL, PurS-like domain |Salmonella typhimurium [TaxId: 90371]
 d3ugja1 :    (LYS73)  (SER141)   [view usage] : d.284.1.2 |PurS-like |PurS-like |FGAM synthase PurL, PurS-like domain |FGAM synthase PurL, PurS-like domain |Salmonella enterica [TaxId: 90371]
 d1twjc_ :     (LYS3)   (VAL78)   [view usage] : d.284.1.1 |PurS-like |PurS-like |PurS subunit of FGAM synthetase |PurS subunit of FGAM synthetase |Bacillus subtilis [TaxId: 1423]
 d1vq3c_ :     (PHE6)   (GLU81)   [view usage] : d.284.1.1 |PurS-like |PurS-like |PurS subunit of FGAM synthetase |PurS subunit of FGAM synthetase |Thermotoga maritima [TaxId: 2336]
 d1t4aa_ :     (MSE1)   (GLU80)   [view usage] : d.284.1.1 |PurS-like |PurS-like |PurS subunit of FGAM synthetase |PurS subunit of FGAM synthetase |Bacillus subtilis [TaxId: 1423]
 d1vq3a_ :     (PHE6)   (GLU81)   [view usage] : d.284.1.1 |PurS-like |PurS-like |PurS subunit of FGAM synthetase |PurS subunit of FGAM synthetase |Thermotoga maritima [TaxId: 2336]
 d1gtda_ :     (MSE4)   (GLU81)   [view usage] : d.284.1.1 |PurS-like |PurS-like |PurS subunit of FGAM synthetase |PurS subunit of FGAM synthetase |Methanobacterium thermoautotrophicum [TaxId: 145262]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.284