Tableau information
Concept source: d2fz4a1 amino acid (a.a.) range (GLY111)(SER165)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY111) (PRO116) E1
(GLY120) (GLU131) H2
(PRO135) (PRO141) E3
(LEU143) (GLY157) H4
(VAL161) (SER165) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 146.3° H2
E3 -50.2° 163.0° E3
H4 101.1° -45.8° 151.1° H4
E5 -93.8° 118.5° -44.5° 163.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2fz4a1 : (GLY111) (SER165) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |DNA repair protein RAD25 |Archaeoglobus fulgidus [TaxId: 2234]
d1e9sf_ : (HIS125) (ASN176) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Bacterial conjugative coupling protein TrwB |Escherichia coli [TaxId: 562]
d1xfka_ : (ILE85) (PHE156) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Formimidoylglutamase HutG |Vibrio cholerae [TaxId: 666]
d1xhka_ : (PRO489) (ASP571) [view usage] : d.14.1.10 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |ATP-dependent protease Lon (La), catalytic domain |ATP-dependent protease Lon (La), catalytic domain |Methanococcus jannaschii [TaxId: 2190]
d1wvaa1 : (LEU53) (ASP124) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Human (Homo sapiens) [TaxId: 9606]
d2a0ma1 : (LEU81) (ASP146) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Trypanosoma cruzi [TaxId: 5693]
d3k6ua_ : (ILE221) (PRO260) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Methanosarcina acetivorans [TaxId: 2214]
d1t5la1 : (LYS33) (SER91) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Nucleotide excision repair enzyme UvrB |Bacillus caldotenax [TaxId: 1395]
d1cu1a3 : (ASN335) (ARG393) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |HCV helicase domain |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
d2j4jf_ : (MET89) (THR139) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d1e9sb_ : (HIS125) (ASN176) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Bacterial conjugative coupling protein TrwB |Escherichia coli [TaxId: 562]
d1yzya1 : (ARG191) (PRO242) [view usage] : c.146.1.1 |YgbK-like |YgbK-like |YgbK-like |Hypothetical protein HI1011 |Haemophilus influenzae [TaxId: 727]
d1vr0a1 : (ARG116) (THR176) [view usage] : c.148.1.1 |ComB-like |ComB-like |ComB-like |2-phosphosulfolactate phosphatase ComB |Clostridium acetobutylicum [TaxId: 1488]
d2eyqa5 : (ALA785) (GLY843) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Transcription-repair coupling factor, TRCF |Escherichia coli [TaxId: 562]
d1z7nf1 : (GLU133) (GLU172) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain |Lactococcus lactis [TaxId: 1358]
d1rifa_ : (ARG131) (GLY192) [view usage] : c.37.1.23 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |DNA helicase UvsW |DNA helicase UvsW |Bacteriophage T4 [TaxId: 10665]
d2z0ma1 : (ASN33) (GLY92) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
d3niqb_ : (VAL83) (HIS146) [view usage] : c.42.1.0 |Arginase/deacetylase |Arginase/deacetylase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3kqla2 : (GLU337) (ARG393) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |HCV helicase domain |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
d1vr0c_ : (ARG116) (THR176) [view usage] : c.148.1.1 |ComB-like |ComB-like |ComB-like |2-phosphosulfolactate phosphatase ComB |Clostridium acetobutylicum [TaxId: 1488]
d4mxra_ : (LEU73) (ASP138) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |automated matches |Trypanosoma cruzi [TaxId: 5693]
d1pc3a_ : (LEU203) (ASN245) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Phosphate-binding protein |Mycobacterium tuberculosis [TaxId: 1773]
d1vpaa_ : (GLY71) (ASP134) [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) |Thermotoga maritima [TaxId: 2336]
d2dpwa1 : (ALA63) (VAL119) [view usage] : c.68.1.19 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |TTHA0179-like |Uncharacterized protein TTHA0179 |Thermus thermophilus [TaxId: 274]
d3nipa_ : (VAL83) (HIS146) [view usage] : c.42.1.0 |Arginase/deacetylase |Arginase/deacetylase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1cu1a2 : (ALA200) (THR254) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |HCV helicase domain |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
d1f48a1 : (PRO9) (ASN60) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Arsenite-translocating ATPase ArsA |Escherichia coli [TaxId: 562]
d1yj5a2 : (VAL391) (PHE449) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |5' polynucleotide kinase-3' phosphatase, C-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, c.68, c.42, c.37, d.14, c.73, c.146, c.148