Protein Concepts Dictionary

Tableau information

Concept source:  d4frua_  amino acid (a.a.) range (SER117)(ILE166)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER117)  (THR123) E1
	  (THR126)  (LYS132) H2
	  (LYS132)  (GLU141) E3
	  (MET143)  (THR152) H4
	  (LEU161)  (ILE166) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2     -150.3°   H2                          
E3      -60.6° -125.5°   E3                   
H4      -96.8°  102.6°  118.1°   H4            
E5      106.8°  -53.5°   79.7° -155.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2mc9a_ :   (SER123)  (SER178)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Catharanthus roseus [TaxId: 4058]
 d1ak4b_ :   (SER110)  (LYS154)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Human (Homo sapiens), variant A [TaxId: 9606]
 d2haqa_ :   (SER132)  (GLU186)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Leishmania donovani [TaxId: 5661]
 d2bitx1 :   (SER110)  (SER165)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Mitochondrial peptidyl-prolyl cis-trans isomerase, cyclophilin F |Human (Homo sapiens) [TaxId: 9606]
 d1pkma1 :   (ALA137)  (VAL175)   [view usage] : b.58.1.1 |PK beta-barrel domain-like |PK beta-barrel domain-like |Pyruvate kinase beta-barrel domain |Pyruvate kinase (PK) |Cat (Felis catus) [TaxId: 9685]
 d1xo7a_ :   (SER111)  (VAL165)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Trypanosoma cruzi [TaxId: 5693]
 d1w74a_ :   (SER125)  (SER182)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Peptidyl-prolyl cis-trans isomerase A, PpiA |Mycobacterium tuberculosis [TaxId: 1773]
 d1e8ka_ :   (SER117)  (LYS172)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Caenorhabditis elegans, isoform 3 [TaxId: 6239]
 d2esla1 :   (SER144)  (THR203)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Human (Homo sapiens), variant C [TaxId: 9606]
 d1ak4a_ :   (SER110)  (ILE158)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Human (Homo sapiens), variant A [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.62,    b.58