Tableau information
Concept source: d1c4oa2 amino acid (a.a.) range (GLU441)(GLY496)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU441) (VAL447) E1
(THR449) (GLY464) H2
(ARG466) (HIS472) E3
(PHE477) (GLY489) H4
(ASP492) (GLY496) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 148.7° H2
E3 -39.2° -166.3° E3
H4 143.3° 32.0° -156.3° H4
E5 -16.1° -164.6° -23.9° -150.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3exfb1 : (PRO111) (ASN172) [view usage] : c.36.1.7 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase Pyr module |E1-beta subunit of pyruvate dehydrogenase, Pyr module |Human (Homo sapiens) [TaxId: 9606]
d1zcea1 : (ALA2) (HIS54) [view usage] : b.122.1.8 |PUA domain-like |PUA domain-like |Atu2648/PH1033-like |Hypothetical protein Atu2648 |Agrobacterium tumefaciens [TaxId: 358]
d2trcp_ : (PHE113) (ARG171) [view usage] : c.47.1.6 |Thioredoxin fold |Thioredoxin-like |Phosducin |Phosducin |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3e9ya1 : (LEU189) (PRO255) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2bvfa1 : (SER40) (LEU88) [view usage] : d.145.1.1 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |FAD-linked oxidases, N-terminal domain |6-hydroxy-d-nicotine oxidase |Arthrobacter nicotinovorans [TaxId: 29320]
d1thoa_ : (LYS3) (ASN59) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
d1rm6b2 : (ASP6) (THR54) [view usage] : d.145.1.3 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CO dehydrogenase flavoprotein N-terminal domain-like |4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain |Thauera aromatica [TaxId: 59405]
d3exeb1 : (PRO111) (ASN172) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2f51a_ : (PRO4) (VAL62) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Trichomonas vaginalis [TaxId: 5722]
d1t3qc2 : (PHE6) (ARG54) [view usage] : d.145.1.3 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CO dehydrogenase flavoprotein N-terminal domain-like |Quinoline 2-oxidoreductase medium subunit QorM |Pseudomonas putida [TaxId: 303]
d1g8fa3 : (GLN394) (PRO456) [view usage] : c.37.1.15 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ATP sulfurylase C-terminal domain |ATP sulfurylase C-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1b0pa2 : (ASP983) (CYS1071) [view usage] : c.36.1.12 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |PFOR PP module |Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI |Desulfovibrio africanus [TaxId: 873]
d2djja1 : (VAL9) (ASP69) [view usage] : c.47.1.2 |Thioredoxin fold |Thioredoxin-like |PDI-like |Protein disulfide isomerase, PDI |Fungus (Humicola insolens) [TaxId: 34413]
d2b5ea2 : (ALA142) (ASN195) [view usage] : c.47.1.2 |Thioredoxin fold |Thioredoxin-like |PDI-like |Protein disulfide isomerase, PDI |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2c31b3 : (PRO471) (MET544) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Oxalyl-CoA decarboxylase |Oxalobacter formigenes [TaxId: 847]
d2c3yb2 : (VAL984) (CYS1071) [view usage] : c.36.1.12 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |PFOR PP module |Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI |Desulfovibrio africanus [TaxId: 873]
d1woua_ : (TYR4) (CYS69) [view usage] : c.47.1.16 |Thioredoxin fold |Thioredoxin-like |Txnl5-like |Putative 42-9-9 protein (thioredoxin containing protein Txnl5) |Human (Homo sapiens) [TaxId: 9606]
d2o7ka_ : (ALA2) (ASP56) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Staphylococcus aureus [TaxId: 1280]
d1bfda2 : (PRO91) (PRO159) [view usage] : c.36.1.5 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase Pyr module |Benzoylformate decarboxylase |Pseudomonas putida [TaxId: 303]
d1u5bb1 : (SER129) (PRO190) [view usage] : c.36.1.7 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase Pyr module |Branched-chain alpha-keto acid dehydrogenase, Pyr module |Human (Homo sapiens) [TaxId: 9606]
d1rqma_ : (MET3) (ASN56) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Alicyclobacillus acidocaldarius, formerly Bacillus acidocaldarius [TaxId: 405212]
d2b5ea1 : (SER377) (THR438) [view usage] : c.47.1.2 |Thioredoxin fold |Thioredoxin-like |PDI-like |Protein disulfide isomerase, PDI |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1v9wa_ : (ALA9) (CYS76) [view usage] : c.47.1.16 |Thioredoxin fold |Thioredoxin-like |Txnl5-like |Putative 42-9-9 protein (thioredoxin containing protein Txnl5) |Mouse (Mus musculus) [TaxId: 10090]
d1ybha2 : (LEU189) (PRO255) [view usage] : c.36.1.5 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase Pyr module |Acetohydroxyacid synthase catalytic subunit |Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]
d1j70a3 : (GLN394) (PRO456) [view usage] : c.37.1.15 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ATP sulfurylase C-terminal domain |ATP sulfurylase C-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4i4ia_ : (ARG162) (ALA221) [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Bacillus stearothermophilus [TaxId: 1422]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.37, c.36, c.47, c.89, b.122, d.145