Tableau information
Concept source: d3fw2a_ amino acid (a.a.) range (SER245)(ASP310)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER245) (TRP251) E1
(SER257) (LYS273) H2
(GLY281) (LEU287) E3
(LYS291) (THR302) H4
(TRP305) (ASP310) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -152.4° H2
E3 -23.8° -157.8° E3
H4 115.9° -59.0° 137.8° H4
E5 -58.3° 130.9° -34.9° 168.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2ewoh_ : (LYS25) (GLU90) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
d1xkna_ : (THR18) (ARG87) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Chlorobium tepidum [TaxId: 1097]
d4ifta_ : (ASN5) (SER72) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
d1nfpa_ : (GLN71) (MET129) [view usage] : c.1.16.2 |TIM beta/alpha-barrel |Bacterial luciferase-like |Non-fluorescent flavoprotein (luxF, FP390) |Non-fluorescent flavoprotein (luxF, FP390) |Photobacterium leiognathi [TaxId: 553611]
d1oc9b_ : (THR46) (PRO106) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin II |Crithidia fasciculata [TaxId: 5656]
d2v3qa1 : (PRO134) (TYR210) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |PstS-like phosphate-binding protein |Human (Homo sapiens) [TaxId: 9606]
d1tr9a_ : (LEU4) (ASP62) [view usage] : c.1.8.7 |TIM beta/alpha-barrel |(Trans)glycosidases |NagZ-like |Beta-hexosaminidase NagZ |Vibrio cholerae [TaxId: 666]
d1xvia_ : (LEU8) (ALA70) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) |Escherichia coli [TaxId: 562]
d1ex2a_ : (MET1) (LEU75) [view usage] : c.51.4.2 |Anticodon-binding domain-like |ITPase-like |Maf-like |Maf protein |Bacillus subtilis [TaxId: 1423]
d2oxna_ : (LEU4) (ASP62) [view usage] : c.1.8.7 |TIM beta/alpha-barrel |(Trans)glycosidases |NagZ-like |Beta-hexosaminidase NagZ |Vibrio cholerae [TaxId: 666]
d3kijc_ : (VAL69) (HIS138) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nlma_ : (LYS7) (GLY65) [view usage] : c.87.1.2 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Peptidoglycan biosynthesis glycosyltransferase MurG |Peptidoglycan biosynthesis glycosyltransferase MurG |Escherichia coli [TaxId: 562]
d1qrqa_ : (LEU83) (ALA157) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Voltage-dependent K+ channel beta subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3s9ya_ : (LYS138) (LYS193) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Plasmodium falciparum [TaxId: 36329]
d2vupa_ : (SER28) (ALA98) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d4dika2 : (ALA310) (GLY378) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d1z82b1 : (MSE3) (ASN61) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d4gvha_ : (VAL4) (ASP62) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Salmonella enterica [TaxId: 99287]
d2r84a1 : (LYS2) (GLU51) [view usage] : c.30.1.8 |PreATP-grasp domain |PreATP-grasp domain |PurP N-terminal domain-like |5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP |Pyrococcus furiosus [TaxId: 2261]
d4gvfa_ : (VAL4) (ASP62) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Salmonella enterica [TaxId: 99287]
d1a9xa2 : (GLY943) (LYS993) [view usage] : c.24.1.1 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain |Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain |Escherichia coli [TaxId: 562]
d1pkxa1 : (GLN5) (SER52) [view usage] : c.24.1.3 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Inosicase |IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC |Human (Homo sapiens) [TaxId: 9606]
d1oc9a_ : (THR46) (PRO106) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin II |Crithidia fasciculata [TaxId: 5656]
d3kcma_ : (VAL54) (ASP119) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Geobacter metallireducens [TaxId: 269799]
d1on4a_ : (VAL35) (GLY106) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thioredoxin-like protein Sco1 (YpmQ), soluble domain |Bacillus subtilis [TaxId: 1423]
d1xm8a_ : (THR48) (ASP93) [view usage] : d.157.1.2 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Glyoxalase II (hydroxyacylglutathione hydrolase) |Glyoxalase II (hydroxyacylglutathione hydrolase) |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1fg4b_ : (THR30) (PRO90) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin II |Crithidia fasciculata [TaxId: 5656]
d2hrfa_ : (LEU160) (THR230) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2rlia_ : (TRP123) (SER194) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3kija_ : (VAL69) (HIS138) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2m6ka_ : (GLN44) (ILE100) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d1f0ka_ : (LYS7) (GLY65) [view usage] : c.87.1.2 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Peptidoglycan biosynthesis glycosyltransferase MurG |Peptidoglycan biosynthesis glycosyltransferase MurG |Escherichia coli [TaxId: 562]
d2az4a1 : (GLN84) (ASN148) [view usage] : d.157.1.10 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |beta-CASP RNA-metabolising hydrolases |Hypothetical protein EF2904 |Enterococcus faecalis [TaxId: 1351]
d3b9nb_ : (VAL223) (GLY280) [view usage] : c.1.16.0 |TIM beta/alpha-barrel |Bacterial luciferase-like |automated matches |automated matches |Geobacillus thermodenitrificans [TaxId: 33940]
d1o96a_ : (MET1) (TRP88) [view usage] : c.26.2.3 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |ETFP subunits |Small, beta subunit of electron transfer flavoprotein ETFP |Methylophilus methylotrophus [TaxId: 17]
d4ig4a_ : (ASN5) (SER72) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.94, c.2, c.108, c.26, c.92, d.157, c.23, c.47, c.87, d.126, c.51, c.24, c.30