Tableau information
Concept source: d2qdda2 amino acid (a.a.) range (THR131)(VAL195)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR131) (THR141) E1
(THR143) (GLY158) H2
(ARG160) (ILE166) E3
(PRO171) (GLY184) H4
(HIS189) (VAL195) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 154.7° H2
E3 -32.4° 155.7° E3
H4 137.9° -34.5° 169.2° H4
E5 -53.7° 133.4° -23.3° 167.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1rhca_ : (GLN4) (THR71) [view usage] : c.1.16.3 |TIM beta/alpha-barrel |Bacterial luciferase-like |F420 dependent oxidoreductases |Coenzyme F420 dependent secondary alcohol dehydrogenase |Methanoculleus thermophilicus [TaxId: 2200]
d3kkeb_ : (SER91) (ASN147) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1bqca_ : (GLU18) (VAL85) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-mannanase |Thermobifida fusca [TaxId: 2021]
d1fvab_ : (GLU115) (GLY196) [view usage] : d.58.28.1 |Ferredoxin-like |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |Cow (Bos taurus) [TaxId: 9913]
d4mgga2 : (ALA134) (ALA194) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Labrenzia aggregata [TaxId: 384765]
d1v9sb_ : (ARG125) (ALA181) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d4jbeb_ : (GLY234) (PRO296) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Saccharomonospora viridis [TaxId: 471857]
d1f9ca1 : (ASP134) (VAL199) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Muconate-lactonizing enzyme |Pseudomonas putida [TaxId: 303]
d3by5a1 : (VAL8) (GLN70) [view usage] : c.151.1.1 |CobE/GbiG C-terminal domain-like |CobE/GbiG C-terminal domain-like |CobE/GbiG C-terminal domain-like |Cobalamin biosynthesis protein CobE |Agrobacterium tumefaciens [TaxId: 358]
d4epkb_ : (ARG114) (PRO178) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d1pz1a_ : (LEU121) (PRO177) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Putative oxidoreductase YhdN |Bacillus subtilis [TaxId: 1423]
d4jbea_ : (GLY234) (PRO296) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Saccharomonospora viridis [TaxId: 471857]
d1l1ra_ : (VAL119) (VAL177) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Adenine PRTase |Giardia intestinalis [TaxId: 5741]
d3wsea_ : (LYS172) (THR220) [view usage] : c.135.1.0 |NIF3 (NGG1p interacting factor 3)-like |NIF3 (NGG1p interacting factor 3)-like |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d3vdpb_ : (GLY100) (ILE172) [view usage] : e.49.1.1 |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Thermoanaerobacter tengcongensis [TaxId: 273068]
d1nfha_ : (HIS4) (GLU69) [view usage] : d.68.6.1 |IF3-like |AlbA-like |DNA-binding protein AlbA |DNA-binding protein AlbA |Archaeoglobus fulgidus [TaxId: 2234]
d4h8na_ : (SER20) (GLY94) [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Candida parapsilosis [TaxId: 5480]
d4nqra_ : (PRO95) (SER153) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Anabaena variabilis [TaxId: 240292]
d3e27a_ : (ILE4) (LEU74) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1o5oa_ : (GLU126) (ALA182) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Uracil PRTase, Upp |Thermotoga maritima [TaxId: 2336]
d1qwka_ : (GLY20) (ALA82) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Hypothetical protein C07D8.6 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2qdda2 : (THR131) (VAL195) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Roseovarius nubinhibens [TaxId: 89187]
d3mued_ : (ARG23) (ALA94) [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Salmonella typhimurium [TaxId: 99287]
d4ooua_ : (LYS36) (LEU131) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Cryptopygus antarcticus [TaxId: 187623]
d3kked_ : (SER91) (ASN147) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d2ot9a1 : (LEU79) (ALA131) [view usage] : c.52.1.33 |Restriction endonuclease-like |Restriction endonuclease-like |YaeQ-like |Hypothetical protein PSPTO1487 |Pseudomonas syringae pv. tomato [TaxId: 323]
d3dv2b_ : (LYS3) (LEU74) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Nicotinamide mononucleotide (NMN) adenylyltransferase |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2muca1 : (ASP134) (VAL199) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Muconate-lactonizing enzyme |Pseudomonas putida [TaxId: 303]
d2ps2a2 : (ASN133) (ALA197) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Aspergillus oryzae [TaxId: 510516]
d2mqea_ : (VAL189) (GLY278) [view usage] : d.79.7.0 |Bacillus chorismate mutase-like |OmpA-like |automated matches |automated matches |Escherichia coli [TaxId: 536056]
d3b9ga_ : (ASN4) (LYS70) [view usage] : c.70.1.1 |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |automated matches |Trypanosoma vivax [TaxId: 5699]
d2qddb2 : (THR131) (VAL195) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Roseovarius nubinhibens [TaxId: 89187]
d4klaa_ : (GLN302) (ARG367) [view usage] : c.92.1.1 |Chelatase-like |Chelatase |Ferrochelatase |Ferrochelatase |Human (Homo sapiens) [TaxId: 9606]
d3i4ka2 : (ASP139) (ILE201) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Corynebacterium glutamicum [TaxId: 1718]
d3pilb_ : (GLU76) (PRO152) [view usage] : d.58.28.0 |Ferredoxin-like |Peptide methionine sulfoxide reductase |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2ff2b_ : (ASN4) (LYS70) [view usage] : c.70.1.1 |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |automated matches |Trypanosoma vivax [TaxId: 5699]
d3b9gb_ : (ASN4) (LYS70) [view usage] : c.70.1.1 |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |automated matches |Trypanosoma vivax [TaxId: 5699]
d1w1za_ : (ASP35) (ALA125) [view usage] : c.1.10.3 |TIM beta/alpha-barrel |Aldolase |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |Prosthecochloris vibrioformis [TaxId: 1098]
d1dp4a_ : (THR45) (ALA107) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Hormone binding domain of the atrial natriuretic peptide receptor |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1udva_ : (LEU5) (ARG73) [view usage] : d.68.6.1 |IF3-like |AlbA-like |DNA-binding protein AlbA |DNA-binding protein AlbA |Sulfolobus solfataricus, Sso10b2 [TaxId: 2287]
d1u8xx1 : (SER7) (THR70) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Maltose-6'-phosphate glucosidase GlvA |Bacillus subtilis [TaxId: 1423]
d1t9gs_ : (LEU4) (GLU90) [view usage] : c.26.2.3 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |ETFP subunits |Small, beta subunit of electron transfer flavoprotein ETFP |Human (Homo sapiens) [TaxId: 9606]
d2ff2a_ : (ASN4) (LYS70) [view usage] : c.70.1.1 |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |automated matches |Trypanosoma vivax [TaxId: 5699]
d3c8nc_ : (LYS5) (THR72) [view usage] : c.1.16.0 |TIM beta/alpha-barrel |Bacterial luciferase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1zmra_ : (ARG15) (LYS93) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Escherichia coli [TaxId: 562]
d1o5ob_ : (GLU126) (ALA182) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Uracil PRTase, Upp |Thermotoga maritima [TaxId: 2336]
d4dqda_ : (LYS59) (MSE116) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 316058]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, d.68, c.2, d.58, c.82, c.26, c.92, c.93, c.135, c.86, c.61, d.79, c.52, e.49, c.70, c.151