Tableau information
Concept source: d4i8qa_ amino acid (a.a.) range (PRO398)(ASN449)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO398) (LYS406) E1
(THR407) (ASP417) H2
(LEU422) (SER428) E3
(ASP430) (ALA440) H4
(GLY444) (ASN449) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 151.6° H2
E3 -50.4° 157.6° E3
H4 118.0° -33.7° 165.8° H4
E5 -76.4° 131.1° -26.5° 159.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3j38o_ : (ILE53) (SER137) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d2f3te_ : (ALA2) (ASN58) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Guanylate kinase |Escherichia coli [TaxId: 562]
d3ek1a_ : (PRO389) (ASN440) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
d2c9ha2 : (TYR284) (LYS365) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3kkkb_ : (TYR4) (TRP85) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Plasmodium falciparum [TaxId: 36329]
d4qava2 : (TYR256) (SER333) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Neisseria meningitidis [TaxId: 662598]
d3jz4a_ : (PRO389) (ASN440) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1mioa_ : (ILE167) (ALA238) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Clostridium pasteurianum [TaxId: 1501]
d2xzmk_ : (LEU53) (THR137) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d3qanc_ : (PRO420) (ASN471) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
d1eiza_ : (GLY92) (LYS164) [view usage] : c.66.1.2 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |RNA methyltransferase FtsJ |RNA methyltransferase FtsJ |Escherichia coli [TaxId: 562]
d4embb_ : (TYR7) (TRP88) [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
d1a4za_ : (VAL404) (ASN454) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Cow (Bos taurus), mitochondrial [TaxId: 9913]
d1bq3a_ : (PRO1) (TRP82) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Phosphoglycerate mutase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3d1mb_ : (LYS46) (GLU127) [view usage] : d.65.1.2 |Hedgehog/DD-peptidase |Hedgehog/DD-peptidase |Hedgehog (development protein), N-terminal signaling domain |Sonic hedgehog |Mouse (Mus musculus) [TaxId: 10090]
d1o9ga_ : (PRO146) (ASP214) [view usage] : c.66.1.29 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA methyltransferase AviRa |rRNA methyltransferase AviRa |Streptomyces viridochromogenes [TaxId: 1938]
d1a4sa_ : (PRO404) (ASN455) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Baltic cod (Gadus callarias) [TaxId: 8053]
d1xq9b_ : (THR13) (TRP93) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Phosphoglycerate mutase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d2w8pa_ : (PRO442) (ASN493) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3pdia_ : (PRO147) (CYS226) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Azotobacter vinelandii [TaxId: 322710]
d3fdja_ : (THR192) (TYR253) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Eubacterium eligens [TaxId: 39485]
d3inlb_ : (PRO403) (ASN454) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
d1o01c_ : (PRO403) (ASN454) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
d1zhha_ : (PHE173) (THR237) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Quorum-sensing signal (autoinducer-2) binding protein LuxP |Vibrio harveyi [TaxId: 669]
d2w8na_ : (PRO442) (ASN493) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2anba_ : (LEU6) (ASN58) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Guanylate kinase |Escherichia coli [TaxId: 562]
d4lihb_ : (PRO402) (ASN453) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1m34a_ : (LYS176) (ALA251) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Azotobacter vinelandii [TaxId: 354]
d3b4wa_ : (PRO391) (ASN442) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1q0ra_ : (SER65) (LEU126) [view usage] : c.69.1.28 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Aclacinomycin methylesterase RdmC |Aclacinomycin methylesterase RdmC |Streptomyces purpurascens [TaxId: 1924]
d3ed6a_ : (PRO394) (ASN445) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d1djna2 : (ASP513) (GLY561) [view usage] : c.3.1.1 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |C-terminal domain of adrenodoxin reductase-like |Trimethylamine dehydrogenase, C-terminal domain |Methylophilus methylotrophus, w3a1 [TaxId: 17]
d4emba_ : (TYR7) (TRP88) [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
d1vlmb_ : (LYS56) (ILE127) [view usage] : c.66.1.41 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |UbiE/COQ5-like |Possible histamine N-methyltransferase TM1293 |Thermotoga maritima [TaxId: 2336]
d3n81g_ : (PRO403) (ASN454) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
d4embc_ : (TYR7) (TRP88) [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
d1o9ha_ : (PRO146) (ASP214) [view usage] : c.66.1.29 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA methyltransferase AviRa |rRNA methyltransferase AviRa |Streptomyces viridochromogenes [TaxId: 1938]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, i.1, c.82, c.92, c.66, c.93, c.37, c.95, c.60, c.3, d.65, c.119