Tableau information
Concept source: d3di0b_ amino acid (a.a.) range (ASP100)(ALA165)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP100) (THR106) E1
(ASN113) (LYS129) H2
(PRO131) (VAL137) E3
(GLU146) (SER154) H4
(VAL160) (ALA165) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 162.6° H2
E3 -30.1° 149.7° E3
H4 152.7° -23.4° 171.9° H4
E5 -49.9° 129.6° -20.6° 152.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2dqxa_ : (ASN10) (MET90) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Soybean (Glycine max) [TaxId: 3847]
d4ooza_ : (LYS36) (LEU131) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Cryptopygus antarcticus [TaxId: 187623]
d1g7va_ : (VAL20) (ASP95) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Escherichia coli [TaxId: 562]
d1f5za_ : (CYS102) (ALA167) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |N-acetylneuraminate lyase |Haemophilus influenzae [TaxId: 727]
d1vd6a_ : (GLU165) (ASP214) [view usage] : c.1.18.3 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Glycerophosphoryl diester phosphodiesterase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2q4qa_ : (GLY32) (LEU95) [view usage] : c.103.1.1 |MTH938-like |MTH938-like |MTH938-like |Hypothetical protein PTD015 (C11orf67) |Human (Homo sapiens) [TaxId: 9606]
d1pyfa_ : (SER151) (PHE204) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Putative oxidoreductase IolS |Bacillus subtilis [TaxId: 1423]
d2nqha_ : (MET1) (SER71) [view usage] : c.1.15.1 |TIM beta/alpha-barrel |Xylose isomerase-like |Endonuclease IV |Endonuclease IV |Escherichia coli [TaxId: 562]
d1f8ma_ : (VAL224) (SER315) [view usage] : c.1.12.7 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Phosphoenolpyruvate mutase/Isocitrate lyase-like |Isocitrate lyase |Mycobacterium tuberculosis [TaxId: 1773]
d1v8fa_ : (GLY18) (GLY89) [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Thermus thermophilus [TaxId: 274]
d1t70a_ : (MET1) (GLY64) [view usage] : d.159.1.9 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |DR1281-like |Putative phosphatase DR1281 |Deinococcus radiodurans [TaxId: 1299]
d1jfxa_ : (VAL5) (ARG66) [view usage] : c.1.8.8 |TIM beta/alpha-barrel |(Trans)glycosidases |1,4-beta-N-acetylmuraminidase |Streptomyces lysozyme |Streptomyces coelicolor, "mueller" dsm3030 [TaxId: 1902]
d1j1za1 : (MET1) (ASP60) [view usage] : c.26.2.1 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |N-type ATP pyrophosphatases |Argininosuccinate synthetase, N-terminal domain |Thermus thermophilus [TaxId: 274]
d4hnoa_ : (MET1) (GLY71) [view usage] : c.1.15.0 |TIM beta/alpha-barrel |Xylose isomerase-like |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1eyrb_ : (ASN5) (PRO72) [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |CMP acylneuraminate synthetase |Neisseria meningitidis [TaxId: 487]
d1vcva1 : (TYR7) (ASP58) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Deoxyribose-phosphate aldolase DeoC |Pyrobaculum aerophilum [TaxId: 13773]
d4pmua_ : (LEU195) (VAL267) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
d1qwjb_ : (PRO41) (SER110) [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |CMP acylneuraminate synthetase |Mouse (Mus musculus) [TaxId: 10090]
d2afkh_ : (GLN145) (ARG213) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d2aamb_ : (ASP35) (ASN91) [view usage] : c.1.8.15 |TIM beta/alpha-barrel |(Trans)glycosidases |TM1410-like |Hypothetical protein TM1410 |Thermotoga maritima [TaxId: 2336]
d2ab1a1 : (GLY32) (LEU95) [view usage] : c.103.1.1 |MTH938-like |MTH938-like |MTH938-like |Hypothetical protein PTD015 (C11orf67) |Human (Homo sapiens) [TaxId: 9606]
d2rdua_ : (THR103) (ASP160) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1g8ma2 : (ALA534) (ASN587) [view usage] : c.97.1.4 |Cytidine deaminase-like |Cytidine deaminase-like |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |Chicken (Gallus gallus) [TaxId: 9031]
d2j88a_ : (ASP220) (SER303) [view usage] : c.1.8.9 |TIM beta/alpha-barrel |(Trans)glycosidases |Bee venom hyaluronidase |automated matches |Honeybee (Apis mellifera) [TaxId: 7460]
d1vlpa2 : (VAL291) (GLY354) [view usage] : c.1.17.2 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |Monomeric nicotinate phosphoribosyltransferase C-terminal domain |Nicotinate phosphoribosyltransferase, C-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3rdkb_ : (ASN186) (VAL260) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Paenibacillus sp. [TaxId: 324057]
d1n2hb_ : (ARG33) (THR105) [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
d1oroa_ : (ARG119) (ILE181) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Orotate PRTase |Escherichia coli [TaxId: 562]
d4k1gb_ : (MET1) (ASP70) [view usage] : c.1.15.1 |TIM beta/alpha-barrel |Xylose isomerase-like |Endonuclease IV |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2nq9a_ : (MET1) (SER71) [view usage] : c.1.15.1 |TIM beta/alpha-barrel |Xylose isomerase-like |Endonuclease IV |Endonuclease IV |Escherichia coli [TaxId: 562]
d4nzpa1 : (LYS6) (ASP67) [view usage] : c.26.2.0 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d1quma_ : (MET1) (SER71) [view usage] : c.1.15.1 |TIM beta/alpha-barrel |Xylose isomerase-like |Endonuclease IV |Endonuclease IV |Escherichia coli [TaxId: 562]
d2hbva1 : (ARG114) (PRO178) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d2muca1 : (PRO245) (MET302) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Muconate-lactonizing enzyme |Pseudomonas putida [TaxId: 303]
d4l4oa_ : (GLY211) (TRP297) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Caldicellulosiruptor bescii [TaxId: 521460]
d3q94a_ : (VAL78) (GLY139) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d1zcfa_ : (PRO218) (THR279) [view usage] : c.88.1.1 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase/Asparaginase |automated matches |Pectobacterium atrosepticum [TaxId: 218491]
d2uz9a2 : (CYS140) (PRO212) [view usage] : c.1.9.9 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |SAH/MTA deaminase-like |Guanine deaminase |Human (Homo sapiens) [TaxId: 9606]
d4m0xa2 : (LYS133) (PRO197) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d1eyra_ : (ASN5) (PRO72) [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |CMP acylneuraminate synthetase |Neisseria meningitidis [TaxId: 487]
d1qwja_ : (PRO41) (SER110) [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |CMP acylneuraminate synthetase |Mouse (Mus musculus) [TaxId: 10090]
d1z69a_ : (GLY149) (CYS211) [view usage] : c.1.16.0 |TIM beta/alpha-barrel |Bacterial luciferase-like |automated matches |automated matches |Methanosarcina barkeri [TaxId: 2208]
d1wd5a_ : (ASP122) (LEU175) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Putative phosphoribosyltransferase TT1426 (TTHA1462) |Thermus thermophilus [TaxId: 274]
d2aama1 : (ASP35) (ASN91) [view usage] : c.1.8.15 |TIM beta/alpha-barrel |(Trans)glycosidases |TM1410-like |Hypothetical protein TM1410 |Thermotoga maritima [TaxId: 2336]
d1wkya2 : (PRO50) (VAL118) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-mannanase |Bacillus sp. JAMB-602 [TaxId: 244966]
d4c03a_ : (LYS87) (GLY141) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1fhla_ : (ASP208) (GLU298) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-1,4-galactanase |Fungus (Aspergillus aculeatus) [TaxId: 5053]
d1nsja_ : (ARG3) (VAL61) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |N-(5'phosphoribosyl)antranilate isomerase, PRAI |Thermotoga maritima [TaxId: 2336]
d3aama_ : (PRO2) (SER71) [view usage] : c.1.15.0 |TIM beta/alpha-barrel |Xylose isomerase-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1yhta1 : (GLN176) (SER238) [view usage] : c.1.8.6 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-N-acetylhexosaminidase catalytic domain |Dispersin B, DspB |Actinobacillus actinomycetemcomitans [TaxId: 714]
d1ufva_ : (GLY18) (GLY89) [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Thermus thermophilus [TaxId: 274]
d4f8eb1 : (HIS52) (MET127) [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4bf7a_ : (ASP208) (GLU297) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Emericella nidulans [TaxId: 162425]
d2czvb_ : (GLY6) (SER60) [view usage] : c.6.3.2 |7-stranded beta/alpha barrel |PHP domain-like |RNase P subunit p30 |Ribonuclease P protein component 3, Rnp3 |Pyrococcus horikoshii [TaxId: 53953]
d1y88a2 : (GLY45) (TRP110) [view usage] : c.52.1.30 |Restriction endonuclease-like |Restriction endonuclease-like |MRR-like |Hypothetical protein AF1548, N-terminal domain |Archaeoglobus fulgidus [TaxId: 2234]
d4u7ja1 : (GLU3) (ASP63) [view usage] : c.26.2.0 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |automated matches |automated matches |Mycobacterium thermoresistibile [TaxId: 1078020]
d2rdwa_ : (THR103) (ASP160) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4k1ga_ : (MET1) (ASP70) [view usage] : c.1.15.1 |TIM beta/alpha-barrel |Xylose isomerase-like |Endonuclease IV |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3gdla_ : (ASN31) (ARG92) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1qtwa_ : (MET1) (SER71) [view usage] : c.1.15.1 |TIM beta/alpha-barrel |Xylose isomerase-like |Endonuclease IV |Endonuclease IV |Escherichia coli [TaxId: 562]
d2aamc_ : (ASP35) (ASN91) [view usage] : c.1.8.15 |TIM beta/alpha-barrel |(Trans)glycosidases |TM1410-like |Hypothetical protein TM1410 |Thermotoga maritima [TaxId: 2336]
d2gp4a1 : (PRO447) (ASP509) [view usage] : c.8.2.2 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |IlvD/EDD C-terminal domain-like |6-phosphogluconate dehydratase EDD |Shewanella oneidensis [TaxId: 70863]
d1p4ra2 : (GLU533) (ASN586) [view usage] : c.97.1.4 |Cytidine deaminase-like |Cytidine deaminase-like |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |Human (Homo sapiens) [TaxId: 9606]
d3iwpa_ : (LEU27) (ARG83) [view usage] : c.1.30.0 |TIM beta/alpha-barrel |CutC-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, d.159, c.6, c.68, c.26, c.66, c.37, c.97, c.8, c.61, c.52, c.88, c.103