Protein Concepts Dictionary

Tableau information

Concept source:  d3h76a1  amino acid (a.a.) range (ASP74)(LEU142)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP74)   (THR80) E1
	   (SER89)   (GLY99) H2
	  (ILE103)  (ARG109) E3
	  (SER113)  (GLY129) H4
	  (ARG132)  (LEU142) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2      126.4°   H2                          
E3      -23.5°  138.8°   E3                   
H4      164.7°  -68.9°  144.7°   H4            
E5      -17.9°  113.0°  -41.3°  167.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3lasa_ :    (ARG32)   (HIS91)   [view usage] : c.53.2.0 |Resolvase-like |beta-carbonic anhydrase, cab |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
 d1u0ma1 :    (ASP99)  (PHE167)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Putative polyketide synthase SCO1206 |Streptomyces coelicolor [TaxId: 1902]
 d4p0ua_ :     (LEU4)   (VAL73)   [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Escherichia coli [TaxId: 1182738]
 d1yt8a1 :   (GLU146)  (ALA194)   [view usage] : c.46.1.2 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Multidomain sulfurtransferase (rhodanese) |Thiosulfate sulfurtransferase PA2603 |Pseudomonas aeruginosa [TaxId: 287]
 d1wdkc1 :    (GLU55)  (MET125)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) |Pseudomonas fragi [TaxId: 296]
 d2dsta1 :    (PRO23)   (GLY88)   [view usage] : c.69.1.39 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |TTHA1544-like |Hypothetical protein TTHA1544 |Thermus thermophilus [TaxId: 274]
 d1usyg_ :   (GLY101)  (ASP147)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain |Thermotoga maritima [TaxId: 2336]
 d2wuab1 :    (GLY96)  (SER165)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Common sunflower (Helianthus annuus) [TaxId: 4232]
 d1ylka_ :    (HIS29)   (HIS87)   [view usage] : c.53.2.0 |Resolvase-like |beta-carbonic anhydrase, cab |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d1wlsa_ :     (ARG2)   (HIS81)   [view usage] : c.88.1.0 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 53953]
 d4esoa_ :   (GLY173)  (ASP243)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4ewpa1 :    (ASP85)  (LEU153)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Micrococcus luteus [TaxId: 465515]
 d2wu9a1 :    (ASP99)  (SER167)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d1mzja2 :   (VAL252)  (PHE318)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway |Streptomyces sp. r1128 [TaxId: 140437]
 d4o6od_ :    (THR79)  (THR141)   [view usage] : e.49.1.1 |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Thermoanaerobacter tengcongensis [TaxId: 273068]
 d1usyh_ :   (GLY101)  (ASP147)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain |Thermotoga maritima [TaxId: 2336]
 d3tena_ :    (ARG29)   (THR87)   [view usage] : c.53.2.0 |Resolvase-like |beta-carbonic anhydrase, cab |automated matches |automated matches |Acidianus sp. [TaxId: 1071056]
 d4ubva1 :    (GLU53)  (MET123)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d1vhka1 :     (GLN2)   (SER45)   [view usage] : b.122.1.2 |PUA domain-like |PUA domain-like |YggJ N-terminal domain-like |Hypothetical protein YqeU |Bacillus subtilis [TaxId: 1423]
 d2wu9b1 :    (ASP99)  (SER167)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d4ecfa_ :   (SER150)  (TYR201)   [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Lactobacillus brevis [TaxId: 387344]
 d2wuaa1 :    (GLY96)  (SER165)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Common sunflower (Helianthus annuus) [TaxId: 4232]
 d4ubvb1 :    (GLU53)  (MET123)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69,    c.94,     c.2,    c.95,   b.122,    c.53,    c.51,    c.88,    c.46,    e.49