Protein Concepts Dictionary

Tableau information

Concept source:  d3kgxb_  amino acid (a.a.) range (THR342)(HIS408)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR342)  (THR347) E1
	  (TRP354)  (SER366) H2
	  (ILE367)  (GLY372) E3
	  (LEU381)  (GLY387) E4
	  (THR392)  (HIS408) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2      132.1°   H2                          
E3      -63.5° -163.4°   E3                   
E4      170.3°  -43.7°  121.9°   E4            
H5      -13.8°  124.4°  -69.5°  167.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4kxka_ :   (THR320)  (HIS386)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3kgxb_ :   (THR342)  (HIS408)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1qz9a_ :   (HIS344)  (LYS402)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Kynureninase |Pseudomonas fluorescens [TaxId: 294]
 d4kyoc_ :   (THR320)  (HIS386)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4cbra_ :   (THR320)  (HIS386)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2yoba_ :   (THR320)  (ALA388)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4cbsa_ :   (THR320)  (HIS386)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1czca_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d2d64a_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d4kyoa_ :   (THR320)  (HIS386)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1yooa_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1wyub_ :   (HIS375)  (LYS440)   [view usage] : c.67.1.7 |PLP-dependent transferase-like |PLP-dependent transferases |Glycine dehydrogenase subunits (GDC-P) |Glycine dehydrogenase subunit 2 (P-protein) |Thermus thermophilus [TaxId: 274]
 d1uu0a_ :   (ASN282)  (GLU332)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
 d1dj9a_ :   (ALA319)  (HIS381)   [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) |Escherichia coli [TaxId: 562]
 d3kgwa_ :   (THR342)  (HIS408)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1m32b_ :   (ILE299)  (MSE362)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |2-aminoethylphosphonate transaminase |Salmonella typhimurium [TaxId: 90371]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.67