Tableau information
Concept source: d2cvka_ amino acid (a.a.) range (LEU53)(LEU106)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU53) (VAL59) E1
(PRO63) (ARG70) H2
(PRO75) (LYS81) E3
(VAL86) (GLY91) E4
(LYS95) (LEU106) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -99.7° H2
E3 137.8° 73.6° E3
E4 -56.4° -109.6° 165.6° E4
H5 123.5° 71.6° -14.4° -178.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2voca_ : (LYS51) (LEU104) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1v98b_ : (LYS84) (GLY139) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1zzoa1 : (PHE127) (THR178) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Lipoprotein DsbF |Mycobacterium tuberculosis [TaxId: 1773]
d1yf1a1 : (TYR93) (ALA159) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella typhimurium [TaxId: 90371]
d1f6mc_ : (VAL55) (ALA108) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
d3uvtc_ : (ALA372) (ALA428) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ttza_ : (ALA28) (ALA74) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Hypothetical protein XCC2852 |Xanthomonas campestris [TaxId: 339]
d2ywma1 : (LYS61) (ARG119) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
d4ecib1 : (ARG27) (THR79) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 388272]
d2eiyb_ : (GLY6) (VAL66) [view usage] : e.17.1.0 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2yzua_ : (LEU53) (LEU106) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3o6ta_ : (THR59) (LEU108) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d3kijc_ : (HIS138) (ILE203) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4txva_ : (GLY157) (THR214) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Bradyrhizobium diazoefficiens [TaxId: 224911]
d1xoaa_ : (THR54) (ALA108) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
d1foha3 : (PHE587) (ILE643) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Phenol hydroxylase, C-terminal domain |Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
d2dlxa1 : (PHE80) (GLY139) [view usage] : c.47.1.24 |Thioredoxin fold |Thioredoxin-like |UAS domain |UBX domain-containing protein 7 |Human (Homo sapiens) [TaxId: 9606]
d4ecia1 : (ARG27) (THR79) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 388272]
d1df3a_ : (GLU1) (GLU33) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Major urinary protein/alpha-2u-globulin |Mouse (Mus musculus) [TaxId: 10090]
d1yexa1 : (TYR93) (ALA159) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella typhimurium [TaxId: 90371]
d3h79a_ : (ALA73) (GLN125) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d1pn0a2 : (PHE587) (ILE643) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Phenol hydroxylase, C-terminal domain |Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
d3kija_ : (HIS138) (GLU207) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ep7a_ : (ILE58) (ALA110) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
d1wrvb_ : (GLY6) (ARG68) [view usage] : e.17.1.0 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |automated matches |automated matches |Thermus thermophilus [TaxId: 274]
d1we0a1 : (TYR94) (ARG159) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Amphibacillus xylanus [TaxId: 1449]
d2pukg_ : (ALA59) (LEU112) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
d1fohb3 : (PHE587) (ILE643) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Phenol hydroxylase, C-terminal domain |Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
d2lsta_ : (VAL56) (CYS115) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.47, b.60, e.17