Tableau information
Concept source: d2w11a_ amino acid (a.a.) range (LYS144)(TYR200)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS144) (SER150) E1
(ASN152) (GLY163) H2
(ARG165) (ARG171) E3
(ASP184) (ASN188) E4
(ASP189) (TYR200) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -169.3° H2
E3 -15.4° -171.2° E3
E4 -33.0° 157.3° -19.4° E4
H5 158.9° -23.4° 147.9° 137.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2obxa_ : (ALA73) (ILE155) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |automated matches |Mesorhizobium loti [TaxId: 381]
d4c2sa_ : (ASN113) (ARG199) [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2v4ma_ : (ASP433) (CYS511) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3fj1d_ : (PRO255) (GLY327) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 246200]
d1jxaa1 : (MET514) (GLY592) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |"Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) |Escherichia coli [TaxId: 562]
d2obxd_ : (ALA73) (ILE155) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |automated matches |Mesorhizobium loti [TaxId: 381]
d3un1d_ : (LYS5) (ILE62) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
d3c0ya1 : (LYS700) (ARG779) [view usage] : c.42.1.2 |Arginase/deacetylase |Arginase/deacetylase |Histone deacetylase, HDAC |Histone deacetylase 7, HDAC7 |Human (Homo sapiens) [TaxId: 9606]
d2bm8g_ : (ARG83) (LEU148) [view usage] : c.66.1.50 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |CmcI-like |Cephalosporin hydroxylase CmcI |Streptomyces clavuligerus [TaxId: 1901]
d3un1c_ : (LYS5) (ARG69) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
d3ouub1 : (LYS4) (ASN63) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d1ooea_ : (GLY4) (SER67) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Dihydropteridin reductase (pteridine reductase) |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2j6ha1 : (MET514) (GLY592) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |automated matches |Escherichia coli [TaxId: 562]
d2cb0b_ : (THR237) (GLY310) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Pyrococcus furiosus [TaxId: 2261]
d1fg5n_ : (LYS45) (ALA131) [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]
d3tbfd_ : (ASN516) (GLY596) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |automated matches |Francisella tularensis [TaxId: 119856]
d3fm9a_ : (SER165) (GLN220) [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |beta-Phosphoglucomutase |Lactococcus lactis [TaxId: 1360]
d3g68a_ : (SER257) (PHE313) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d2nvoa1 : (ASP455) (GLY529) [view usage] : c.62.1.0 |vWA-like |vWA-like |automated matches |automated matches |Deinococcus radiodurans [TaxId: 1299]
d3un1b_ : (LYS5) (ILE62) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
d2obxf_ : (ALA73) (ILE155) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |automated matches |Mesorhizobium loti [TaxId: 381]
d2cb0a_ : (THR237) (VAL297) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Pyrococcus furiosus [TaxId: 2261]
d2c20a_ : (ASN2) (GLN65) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
d3vaya_ : (ALA175) (ALA230) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Pseudomonas syringae [TaxId: 223283]
d1i52a_ : (ASP7) (ALA96) [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.2, c.68, c.108, c.66, c.80, c.42, c.62, c.16, c.30