Protein Concepts Dictionary

Tableau information

Concept source:  d3mzna2  amino acid (a.a.) range (THR359)(ARG411)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR359)  (HIS364) E1
	  (HIS364)  (ASP369) H2
	  (PRO377)  (ASP382) E3
	  (LYS384)  (THR390) E4
	  (ASP400)  (ARG411) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2       37.5°   H2                          
E3     -130.6° -120.5°   E3                   
E4       89.4°   78.9°  136.6°   E4            
H5       62.5°   98.4°   95.7° -121.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qwrb_ :    (ILE95)  (GLY148)   [view usage] : b.82.1.3 |Double-stranded beta-helix |RmlC-like cupins |Type I phosphomannose isomerase |Mannose-6-phosphate isomerase ManA |Bacillus subtilis [TaxId: 1423]
 d3nfua2 :   (THR359)  (LEU412)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Chromohalobacter salexigens [TaxId: 290398]
 d1bqga1 :   (THR369)  (SER421)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |D-glucarate dehydratase |Pseudomonas putida [TaxId: 303]
 d2gdqa1 :   (ILE325)  (TYR367)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Hypothetical protein YitF |Bacillus subtilis [TaxId: 1423]
 d4g8ta2 :   (THR359)  (GLY414)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Actinobacillus succinogenes [TaxId: 339671]
 d1jcta1 :   (THR363)  (LYS416)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |D-glucarate dehydratase |Escherichia coli [TaxId: 562]
 d3mznb2 :   (THR359)  (LEU412)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Chromohalobacter salexigens [TaxId: 290398]
 d3ct2a2 :   (TRP326)  (PHE372)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 220664]
 d3mzna2 :   (THR359)  (ARG411)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Chromohalobacter salexigens [TaxId: 290398]
 d3i4ka2 :   (TYR326)  (THR373)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Corynebacterium glutamicum [TaxId: 1718]
 d3dgba2 :   (SER325)  (PHE372)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 220664]
 d1ec7a1 :   (THR363)  (GLN415)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |D-glucarate dehydratase |Escherichia coli [TaxId: 562]
 d2gged1 :   (ILE325)  (TYR367)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Hypothetical protein YitF |Bacillus subtilis [TaxId: 1423]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1,    b.82