Protein Concepts Dictionary

Tableau information

Concept source:  d3tzoa_  amino acid (a.a.) range (PRO12)(ASP66)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO12)   (ALA18) E1
	   (ASP27)   (GLU36) H2
	   (THR40)   (ASN46) E3
	   (ALA51)   (ARG56) E4
	   (ARG56)   (ASP66) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2     -162.2°   H2                          
E3      -36.4° -154.4°   E3                   
E4       90.6°  -76.0°  127.0°   E4            
H5      -82.1°   95.7°  -62.9° -124.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3zsna_ :     (GLU5)   (GLY57)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Micromonospora griseorubida [TaxId: 28040]
 d1gwia_ :     (ARG9)   (ASP58)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp154c1 monooxygenase |Streptomyces coelicolor [TaxId: 1902]
 d3vb9a_ :   (GLY157)  (GLN203)   [view usage] : e.65.1.1 |VPA0735-like |VPA0735-like |VPA0735-like |Hypothetical protein VPA0735 |Vibrio parahaemolyticus [TaxId: 670]
 d3cv8a_ :    (PHE16)   (ASP66)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces griseolus [TaxId: 1909]
 d2y5na_ :     (GLU5)   (ASP58)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Micromonospora griseorubida [TaxId: 28040]
 d4h24c_ :     (THR1)   (ASP63)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d1ooca_ :    (ILE35)   (ALA79)   [view usage] : b.80.1.1 |Single-stranded right-handed beta-helix |Pectin lyase-like |Pectate lyase-like |Pectate lyase |Erwinia chrysanthemi, type A [TaxId: 556]
 d2nzaa_ :    (PRO15)   (ASP69)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
 d2y46a_ :     (GLU5)   (GLY57)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Micromonospora griseorubida [TaxId: 28040]
 d3tnka_ :    (PRO12)   (ASP66)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
 d2dkka_ :    (PRO15)   (ASP69)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
 d2y5nb_ :     (GLU5)   (ASP58)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Micromonospora griseorubida [TaxId: 28040]
 d3tzoa_ :    (PRO12)   (ASP66)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 1902]
 d4j6cb_ :     (THR9)   (ASP57)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Nocardia farcinica [TaxId: 247156]
 d1se6b_ :    (PRO12)   (ASP66)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
 d2d0ea_ :    (PRO12)   (ASP66)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
 d2d09a_ :    (PRO12)   (ASP66)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
 d1zo4a_ :     (THR1)   (ASP63)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d1smja_ :     (THR1)   (ASP63)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d4aw3a_ :     (GLU5)   (ASP58)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Micromonospora griseorubida [TaxId: 28040]
 d1gwib_ :     (ALA8)   (ASP58)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp154c1 monooxygenase |Streptomyces coelicolor [TaxId: 1902]
 d1wupb_ :    (ILE94)  (GLU131)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Serratia marcescens [TaxId: 615]
 d4j6ca_ :     (THR9)   (ASP57)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Nocardia farcinica [TaxId: 247156]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.80,   a.104,   d.157,    e.65