Protein Concepts Dictionary

Tableau information

Concept source:  d1qisa_  amino acid (a.a.) range (MET359)(LEU409)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (MET359)  (GLY364) E1
	  (THR366)  (GLY378) H2
	  (GLY378)  (VAL382) E3
	  (GLY385)  (ALA390) E4
	  (ALA398)  (LEU409) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2      116.8°   H2                          
E3      -91.3° -149.4°   E3                   
E4      158.5°   55.0°  102.7°   E4            
H5      -18.4°  131.5°  -74.1° -169.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qisa_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1g4va_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1qira_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1b4xa_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d4effa_ :   (MET349)  (LEU398)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
 d1aiaa_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d2d66a_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1aria_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d2d61a_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1g7wa_ :   (MET359)  (VAL408)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1ahea_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1asba_ :   (MET359)  (LEU408)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1arha_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1ix6a_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1scjb_ :   (TYR310)  (ASP362)   [view usage] : d.58.3.2 |Ferredoxin-like |Protease propeptides/inhibitors |Subtilase propeptides/inhibitors |Subtilisin prosegment |Bacillus subtilis [TaxId: 1423]
 d1qita_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1g7xa_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1ix8a_ :   (MET359)  (LEU409)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d3zzja_ :   (MET347)  (LEU396)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.67,    d.58