Tableau information
Concept source: d2cbvb_ amino acid (a.a.) range (LYS393)(ASN441)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS393) (SER399) E1
(GLY409) (ARG413) H2
(ILE416) (ASP420) E3
(GLN424) (VAL428) E4
(ASP430) (ASN441) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -117.2° H2
E3 -20.7° -124.6° E3
E4 133.5° 28.5° 148.7° E4
H5 -169.1° 60.2° -150.4° -49.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2vrjb_ : (GLY394) (ASN442) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Thermotoga maritima [TaxId: 2336]
d2jalb_ : (LYS393) (ASN441) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Thermotoga maritima [TaxId: 2336]
d3ahyc_ : (LYS412) (LEU462) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Trichoderma reesei [TaxId: 51453]
d1oifa_ : (LYS393) (ASN441) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Thermotoga maritima [TaxId: 2336]
d3pbga_ : (LYS416) (GLN465) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |6-phospho-beta-D-galactosidase, PGAL |Lactococcus lactis [TaxId: 1358]
d1w3ja_ : (LYS393) (ASN441) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Thermotoga maritima [TaxId: 2336]
d3ahya_ : (LYS412) (LEU462) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Trichoderma reesei [TaxId: 51453]
d1e4ia_ : (LYS393) (ASN442) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Bacillus polymyxa [TaxId: 1406]
d3ahyb_ : (LYS412) (LEU462) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Trichoderma reesei [TaxId: 51453]
d1tr1a_ : (LYS393) (ASN442) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Bacillus polymyxa [TaxId: 1406]
d1bgaa_ : (LYS393) (ASN442) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Bacillus polymyxa [TaxId: 1406]
d3apga_ : (ARG405) (LYS454) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Pyrococcus furiosus [TaxId: 2261]
d2cbvb_ : (LYS393) (ASN441) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Thermotoga maritima [TaxId: 2336]
d4pbga_ : (LYS416) (THR464) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |6-phospho-beta-D-galactosidase, PGAL |Lactococcus lactis [TaxId: 1358]
d4ptva_ : (ARG396) (LYS445) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Halothermothrix orenii [TaxId: 373903]
d2pbga_ : (LYS416) (THR464) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |6-phospho-beta-D-galactosidase, PGAL |Lactococcus lactis [TaxId: 1358]
d1wcga1 : (ILE411) (THR461) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Thioglucosidase |Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]
d1qoxa_ : (LYS397) (ARG445) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
d3wdpp_ : (ARG405) (LYS454) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Pyrococcus furiosus [TaxId: 2261]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1