Protein Concepts Dictionary

Tableau information

Concept source:  d2p7qe_  amino acid (a.a.) range (HIS69)(ALA121)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (HIS69)   (GLN73) E1
	   (VAL79)   (GLY90) H2
	   (VAL91)   (PRO95) E3
	  (GLY104)  (TYR110) E4
	  (HIS115)  (ALA121) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2      135.1°   H2                          
E3      -87.0° -129.6°   E3                   
E4      133.2°   10.9°  137.1°   E4            
E5      -28.2° -155.3°  -58.9°  158.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4mtqb_ :    (HIS74)  (GLN125)   [view usage] : d.32.1.0 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
 d4mtsa_ :    (HIS74)  (GLN125)   [view usage] : d.32.1.0 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
 d4jd1a_ :    (HIS66)  (THR118)   [view usage] : d.32.1.0 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
 d1zswa1 :     (HIS8)   (LEU67)   [view usage] : d.32.1.10 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |BC1024-like |Hypothetical protein BC1024 |Bacillus cereus [TaxId: 1396]
 d2a4wa_ :    (ARG72)  (PHE126)   [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |automated matches |Streptomyces caespitosus [TaxId: 53502]
 d3emva_ :    (PRO18)   (SER64)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Plasmodium vivax [TaxId: 5855]
 d3omsa_ :    (SER81)  (LEU133)   [view usage] : d.32.1.0 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |automated matches |automated matches |Bacillus cereus [TaxId: 226900]
 d3isqa1 :    (LYS94)  (ASN151)   [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |4-hydroxyphenylpyruvate dioxygenase, HppD |Human (Homo sapiens) [TaxId: 9606]
 d1klla_ :    (ARG72)  (PHE126)   [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |Mitomycin resistance protein D, MRD |Streptomyces lavendulae [TaxId: 1914]
 d2pjsb_ :    (ASP64)  (SER114)   [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |Uncharacterized protein Atu1953 |Agrobacterium tumefaciens [TaxId: 358]
 d4mtsb_ :    (HIS74)  (GLN125)   [view usage] : d.32.1.0 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
 d1u7ia_ :    (SER79)  (LEU131)   [view usage] : d.32.1.7 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |3-demethylubiquinone-9 3-methyltransferase |Hypothetical protein PA1358 |Pseudomonas aeruginosa [TaxId: 287]
 d1u7ib_ :    (SER79)  (LEU131)   [view usage] : d.32.1.7 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |3-demethylubiquinone-9 3-methyltransferase |Hypothetical protein PA1358 |Pseudomonas aeruginosa [TaxId: 287]
 d3hdpa_ :    (HIS75)  (GLU127)   [view usage] : d.32.1.0 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |automated matches |automated matches |Clostridium acetobutylicum [TaxId: 1488]
 d2a4xa_ :    (ARG72)  (LEU131)   [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |automated matches |Streptomyces caespitosus [TaxId: 53502]
 d2pwwa1 :     (LEU1)   (ALA59)   [view usage] : d.129.11.1 |TBP-like |YugN-like |YugN-like |Uncharacterized protein ABC2387 |Bacillus clausii [TaxId: 79880]
 d3hpva1 :    (GLY10)   (GLU60)   [view usage] : d.32.1.0 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |automated matches |automated matches |Pseudomonas sp. [TaxId: 237609]
 d1npbd_ :    (HIS67)  (VAL116)   [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |Fosfomycin resistance protein A (FosA) |Serratia marcescens [TaxId: 615]
 d1sqia1 :    (LYS94)  (ASN151)   [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |4-hydroxyphenylpyruvate dioxygenase, HppD |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1twua_ :    (GLN12)   (TYR66)   [view usage] : d.32.1.8 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Hypothetical protein YycE |Hypothetical protein YycE |Bacillus subtilis [TaxId: 1423]
 d4ir0a_ :    (HIS66)  (THR118)   [view usage] : d.32.1.0 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
 d2qh0a_ :    (TYR76)  (GLU129)   [view usage] : d.32.1.0 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |automated matches |automated matches |Clostridium acetobutylicum [TaxId: 1488]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.56,   d.129,    d.32