Tableau information
Concept source: d1klna1 amino acid (a.a.) range (ASN329)(VAL385)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN329) (ASP335) E1
(GLU337) (ALA349) H2
(PHE352) (THR358) E3
(GLY370) (GLU376) E4
(VAL379) (VAL385) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -120.1° H2
E3 -67.7° -133.6° E3
E4 131.1° 47.1° 160.5° E4
E5 -35.2° -131.4° -33.1° 166.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1d8ya1 : (ASN329) (VAL385) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Escherichia coli [TaxId: 562]
d1nh6a3 : (GLY475) (PHE515) [view usage] : d.26.3.1 |FKBP-like |Chitinase insertion domain |Chitinase insertion domain |Chitinase A |Serratia marcescens [TaxId: 615]
d1xhga2 : (GLY241) (TYR307) [view usage] : d.26.3.1 |FKBP-like |Chitinase insertion domain |Chitinase insertion domain |Signal processing protein (SPC-40, MGP-40) |Pig (Sus scrofa) [TaxId: 9823]
d4fyja_ : (GLN5) (ILE64) [view usage] : c.56.3.0 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3keba_ : (ASN105) (ARG152) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Chromobacterium violaceum [TaxId: 536]
d1klna1 : (ASN329) (VAL385) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Escherichia coli [TaxId: 562]
d1e15a3 : (ARG338) (THR378) [view usage] : d.26.3.1 |FKBP-like |Chitinase insertion domain |Chitinase insertion domain |Chitinase B |Serratia marcescens [TaxId: 615]
d2jrca_ : (MET1) (PRO65) [view usage] : c.56.3.0 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2y9na_ : (ASN86) (LEU123) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |automated matches |Hypocrea lixii [TaxId: 5544]
d1mpya2 : (ASP152) (HIS205) [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |Catechol 2,3-dioxygenase (metapyrocatechase) |Pseudomonas putida, mt2 [TaxId: 303]
d1d9da1 : (ASN329) (VAL385) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Escherichia coli [TaxId: 562]
d3l20a_ : (LEU86) (THR148) [view usage] : d.32.1.0 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |automated matches |automated matches |Staphylococcus aureus [TaxId: 367830]
d1eika_ : (GLN9) (ASP77) [view usage] : d.78.1.1 |RPB5-like RNA polymerase subunit |RPB5-like RNA polymerase subunit |RPB5 |RNA polymerase subunit RBP5 (RNA polymerase subunit H) |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1kfwa2 : (ALA355) (SER387) [view usage] : d.26.3.1 |FKBP-like |Chitinase insertion domain |Chitinase insertion domain |Psychrophilic chitinase B |Arthrobacter sp., tad20 [TaxId: 1667]
d1ivya_ : (GLN363) (GLY426) [view usage] : c.69.1.5 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Serine carboxypeptidase-like |Human 'protective protein', HPP |Human (Homo sapiens) [TaxId: 9606]
d3odga_ : (ILE36) (GLY92) [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Yersinia pseudotuberculosis [TaxId: 633]
d1kfda1 : (ASN329) (VAL385) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Escherichia coli [TaxId: 562]
d1pjza_ : (VAL46) (GLY87) [view usage] : c.66.1.36 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Thiopurine S-methyltransferase |Thiopurine S-methyltransferase |Pseudomonas syringae [TaxId: 317]
d1owqa2 : (GLY241) (ALA306) [view usage] : d.26.3.1 |FKBP-like |Chitinase insertion domain |Chitinase insertion domain |Signal processing protein (SPC-40, MGP-40) |Cow (Bos taurus) [TaxId: 9913]
d1twua_ : (LEU81) (ASN132) [view usage] : d.32.1.8 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Hypothetical protein YycE |Hypothetical protein YycE |Bacillus subtilis [TaxId: 1423]
d1ctna3 : (GLY475) (PHE515) [view usage] : d.26.3.1 |FKBP-like |Chitinase insertion domain |Chitinase insertion domain |Chitinase A |Serratia marcescens [TaxId: 615]
d2esca2 : (GLY241) (ALA306) [view usage] : d.26.3.1 |FKBP-like |Chitinase insertion domain |Chitinase insertion domain |Signal processing protein (SPC-40, MGP-40) |Cow (Bos taurus) [TaxId: 9913]
d4ewla_ : (ASP224) (ALA269) [view usage] : c.134.1.1 |LmbE-like |LmbE-like |LmbE-like |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, b.29, c.56, c.66, c.47, c.55, d.32, d.26, c.134, d.78