Protein Concepts Dictionary

Tableau information

Concept source:  d1t3ab_  amino acid (a.a.) range (PRO1)(PRO42)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PRO1)    (ASN7) E1
	   (ASN13)   (LEU18) H2
	   (LEU18)   (GLY24) E3
	   (LYS30)   (MET35) E4
	   (ASN37)   (PRO42) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2      -92.6°   H2                          
E3     -103.4°  -30.9°   E3                   
E4      153.0°   95.1°   96.3°   E4            
E5      -28.0°  -66.7°  -85.2°  140.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1zkwa_ :     (PRO1)   (PRO42)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
 d1t3ca_ :     (PRO1)   (PRO42)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype E [TaxId: 1491]
 d1t3cb_ :     (PRO1)   (PRO42)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype E [TaxId: 1491]
 d1zn3a_ :     (PRO1)   (PRO42)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
 d1t3ab_ :     (PRO1)   (PRO42)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype E [TaxId: 1491]
 d1zkwb_ :     (PRO1)   (PRO42)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.92