Tableau information
Concept source: d1jnyb2 amino acid (a.a.) range (VAL388)(PRO429)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL388) (LYS394) E1
(PHE404) (ARG409) H2
(ARG409) (MET415) E3
(VAL419) (VAL425) E4
(VAL425) (PRO429) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 92.9° H2
E3 72.1° -24.4° E3
E4 -97.1° 141.6° 154.0° E4
E5 -36.5° 94.6° 85.2° -73.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3wxme3 : (VAL388) (LYS431) [view usage] : b.44.1.0 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |automated matches |automated matches |Aeropyrum pernix [TaxId: 56636]
d3wxma3 : (VAL388) (LYS431) [view usage] : b.44.1.0 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |automated matches |automated matches |Aeropyrum pernix [TaxId: 272557]
d1jnya2 : (VAL388) (PRO429) [view usage] : b.44.1.1 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |Elongation factor eEF-1alpha, C-terminal domain |Sulfolobus solfataricus [TaxId: 2287]
d1jnyb2 : (VAL388) (PRO429) [view usage] : b.44.1.1 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |Elongation factor eEF-1alpha, C-terminal domain |Sulfolobus solfataricus [TaxId: 2287]
d3vmfa3 : (VAL388) (ALA430) [view usage] : b.44.1.0 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |automated matches |automated matches |Aeropyrum pernix [TaxId: 272557]
d3wxmc3 : (VAL388) (LYS431) [view usage] : b.44.1.0 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |automated matches |automated matches |Aeropyrum pernix [TaxId: 56636]
d2gixb_ : (ASN55) (LEU231) [view usage] : b.1.18.16 |Immunoglobulin-like beta-sandwich |E set domains |Cytoplasmic domain of inward rectifier potassium channel |automated matches |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.1, b.44