Tableau information
Concept source: d1u69a_ amino acid (a.a.) range (PHE78)(PRO120)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE78) (ASP83) E1
(GLN85) (GLY99) H2
(GLY99) (ALA104) E3
(GLY106) (ASP110) E4
(ILE114) (PRO120) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 148.2° H2
E3 -69.0° -129.5° E3
E4 130.3° 35.7° 160.6° E4
E5 -18.7° -161.9° -51.3° 147.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1v4nc_ : (SER10) (PRO58) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |5'-deoxy-5'-methylthioadenosine phosphorylase |Sulfolobus tokodaii [TaxId: 111955]
d1u81a_ : (MET18) (THR64) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Human (Homo sapiens), ARF1 [TaxId: 9606]
d4ac9d4 : (ASP2) (ASP65) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Elongation factor SelB, N-terminal domain |Methanococcus maripaludis [TaxId: 39152]
d3bc1a_ : (ASP7) (THR75) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2x77a_ : (ASP18) (TRP69) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Leishmania major [TaxId: 5664]
d1wtaa_ : (HIS13) (PRO61) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Aeropyrum pernix [TaxId: 272557]
d3ozca_ : (ALA9) (ALA59) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |5'-deoxy-5'-methylthioadenosine phosphorylase |Human (Homo sapiens) [TaxId: 9606]
d3uvia_ : (ARG97) (PRO137) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
d1mh1a_ : (GLY1) (ALA59) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rac |Human (Homo sapiens) [TaxId: 9606]
d1e0sa_ : (ARG15) (TRP62) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Human (Homo sapiens), ARF6 [TaxId: 9606]
d1ewja_ : (PHE60) (GLN118) [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |Bleomycin resistance protein, BRP |Klebsiella pneumoniae [TaxId: 573]
d1lnza2 : (ASP160) (ASP212) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Obg GTP-binding protein middle domain |Bacillus subtilis [TaxId: 1423]
d1u69a_ : (PHE78) (PRO120) [view usage] : d.32.1.7 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |3-demethylubiquinone-9 3-methyltransferase |Hypothetical protein PA2721 |Pseudomonas aeruginosa [TaxId: 287]
d2h17a_ : (HIS17) (ASP66) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2hbka2 : (ASP210) (THR267) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exosome complex exonuclease RRP6 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2pjsa1 : (ASP64) (LEU113) [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |Uncharacterized protein Atu1953 |Agrobacterium tumefaciens [TaxId: 358]
d2wtxa_ : (ASP180) (ILE227) [view usage] : c.87.1.6 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Trehalose-6-phosphate synthase, OtsA |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3j3bk_ : (PRO2) (ASP49) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Homo sapiens [TaxId: 9606]
d2wtxd_ : (ASP180) (ILE227) [view usage] : c.87.1.6 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Trehalose-6-phosphate synthase, OtsA |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1tgoa1 : (ASP204) (TYR261) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Thermococcus gorgonarius [TaxId: 71997]
d1z06a1 : (PHE34) (GLN92) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab-33b |Mouse (Mus musculus) [TaxId: 10090]
d2a4wb_ : (ARG272) (LEU331) [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |automated matches |Streptomyces caespitosus [TaxId: 53502]
d1v4nb_ : (SER10) (PRO58) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |5'-deoxy-5'-methylthioadenosine phosphorylase |Sulfolobus tokodaii [TaxId: 111955]
d3dz8a_ : (LYS24) (ASP77) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1fzqa_ : (ARG19) (ASP67) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Mouse (Mus musculus), ARL3 [TaxId: 10090]
d1z6xa1 : (GLN17) (TRP66) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Human (Homo sapiens), ARF4 [TaxId: 9606]
d1ecsa_ : (PHE60) (GLN118) [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |Bleomycin resistance protein, BRP |Klebsiella pneumoniae [TaxId: 573]
d4hqva_ : (ARG97) (PRO137) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 264203]
d1gz5a_ : (ASP180) (ILE227) [view usage] : c.87.1.6 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Trehalose-6-phosphate synthase, OtsA |Trehalose-6-phosphate synthase, OtsA |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, i.1, c.56, c.37, c.55, c.87, d.32