Tableau information
Concept source: d4n1cb_ amino acid (a.a.) range (THR69)(ILE106)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR69) (ILE75) E1
(GLN79) (THR85) H2
(TYR86) (TYR92) E3
(PRO95) (GLY99) E4
(GLN100) (ILE106) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -142.9° H2
E3 145.6° 60.0° E3
E4 -52.5° -122.0° 151.4° E4
E5 -18.2° -152.1° 147.8° 39.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2fcba2 : (PRO139) (GLN175) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fc gamma receptor ectodomain (CD32) |Human (Homo sapiens), IIb [TaxId: 9606]
d1nbqa2 : (GLY195) (GLU233) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Junction adhesion molecule, JAM, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1dqmh1 : (GLN77) (SER112) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.2 [TaxId: 10090]
d1ghfh1 : (ALA78) (SER114) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d3pxja2 : (PHE193) (VAL227) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d4a6ya1 : (ALA73) (LEU109) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2yd1a2 : (PHE193) (VAL227) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3eotl1 : (THR70) (ILE107) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1wwca_ : (LEU363) (LEU396) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |NT3 binding domain of trkC receptor |Human (Homo sapiens) [TaxId: 9606]
d1fcga2 : (PRO137) (GLN173) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fc gamma receptor ectodomain (CD32) |Human (Homo sapiens), IIa [TaxId: 9606]
d3dvna1 : (THR69) (ILE108) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Human (Homo sapiens), cluster 3.2 [TaxId: 9606]
d1x0ha1 : (ILE8) (TYR68) [view usage] : d.332.1.1 |RGC domain-like |RGC domain-like |RGC domain |Ras GTPase-activating-like protein IQGAP1 |Human (Homo sapiens) [TaxId: 9606]
d2iepb2 : (LEU175) (PHE211) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3wjlc2 : (PRO134) (GLN170) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2aw2x_ : (LEU100) (ASP135) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |B- and T-lymphocyte attenuator CD272 |Human (Homo sapiens) [TaxId: 9606]
d4laqh_ : (VAL78) (SER112) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3gkwl1 : (THR69) (THR107) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ic1a1 : (GLU141) (VAL186) [view usage] : b.1.1.3 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C2 set domains |Intercellular cell adhesion molecule-1 (ICAM-1) |Human (Homo sapiens) [TaxId: 9606]
d2z8vc_ : (LYS64) (VAL112) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Spotted wobbegong (Orectolobus maculatus) [TaxId: 168098]
d4qo1a_ : (VAL80) (VAL122) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Llama (Lama glama) [TaxId: 9844]
d1t83c2 : (ASP138) (THR171) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fc gamma receptor ectodomain (CD32) |Human (Homo sapiens), III [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.1, d.332