Tableau information
Concept source: d2e4pa_ amino acid (a.a.) range (THR2)(THR39)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR2) (CYS7) E1
(SER8) (PRO13) H2
(GLY15) (ASP23) E3
(GLN25) (ASN31) E4
(GLU35) (THR39) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 52.3° H2
E3 130.1° 133.6° E3
E4 -60.1° -71.9° 154.5° E4
E5 110.6° 84.5° -49.6° 155.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ww9a1 : (HIS28) (LYS66) [view usage] : b.33.1.2 |ISP domain |ISP domain |Ring hydroxylating alpha subunit ISP domain |Terminal oxygenase component of carbazole CarAa |Janthinobacterium sp. J3 [TaxId: 213804]
d1fqta_ : (MET1) (THR39) [view usage] : b.33.1.1 |ISP domain |ISP domain |Rieske iron-sulfur protein (ISP) |Rieske-type ferredoxin associated with biphenyl dioxygenase |Burkholderia cepacia [TaxId: 292]
d2e4qc_ : (THR2) (THR39) [view usage] : b.33.1.1 |ISP domain |ISP domain |Rieske iron-sulfur protein (ISP) |automated matches |Pseudomonas sp. [TaxId: 306]
d4fc3e_ : (ASN28) (GLU83) [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 196620]
d1ze1a1 : (PRO230) (ALA280) [view usage] : b.122.1.1 |PUA domain-like |PUA domain-like |PUA domain |Pseudouridine synthase II TruB, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d2yvjb_ : (THR2) (THR39) [view usage] : b.33.1.1 |ISP domain |ISP domain |Rieske iron-sulfur protein (ISP) |automated matches |Pseudomonas sp. [TaxId: 306]
d3gcea_ : (SER9) (SER48) [view usage] : b.33.1.0 |ISP domain |ISP domain |automated matches |automated matches |Nocardioides aromaticivorans [TaxId: 200618]
d2gbwa1 : (ALA37) (ILE77) [view usage] : b.33.1.0 |ISP domain |ISP domain |automated matches |automated matches |Sphingobium yanoikuyae [TaxId: 13690]
d2qpza_ : (THR1) (ASP41) [view usage] : b.33.1.0 |ISP domain |ISP domain |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d2bmoa1 : (ASN36) (LEU76) [view usage] : b.33.1.2 |ISP domain |ISP domain |Ring hydroxylating alpha subunit ISP domain |Nitrobenzene dioxygenase alpha subunit, NBDO-alpha |Comamonas sp. JS765 [TaxId: 58226]
d4emjb_ : (THR1) (GLN39) [view usage] : b.33.1.0 |ISP domain |ISP domain |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d3gcfa1 : (HIS34) (ALA72) [view usage] : b.33.1.0 |ISP domain |ISP domain |automated matches |automated matches |Nocardioides aromaticivorans [TaxId: 200618]
d2akja3 : (VAL475) (ILE529) [view usage] : d.134.1.1 |Nitrite and sulphite reductase 4Fe-4S domain-like |Nitrite and sulphite reductase 4Fe-4S domain-like |Nitrite and sulphite reductase 4Fe-4S domain-like |Ferredoxin--nitrite reductase, NIR |Spinach (Spinacia oleracea) [TaxId: 3562]
d2e4pa_ : (THR2) (THR39) [view usage] : b.33.1.1 |ISP domain |ISP domain |Rieske iron-sulfur protein (ISP) |automated matches |Pseudomonas sp. [TaxId: 306]
d1z01a1 : (HIS43) (LYS81) [view usage] : b.33.1.2 |ISP domain |ISP domain |Ring hydroxylating alpha subunit ISP domain |2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO |Pseudomonas putida [TaxId: 303]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.122, b.1, d.134, b.33