Protein Concepts Dictionary

Tableau information

Concept source:  d2hu5b1  amino acid (a.a.) range (GLY228)(ILE273)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY228)  (ASP232) E1
	  (LYS238)  (TYR243) H2
	  (THR246)  (ASP256) E3
	  (ALA260)  (GLU266) E4
	  (ARG268)  (ILE273) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2      -88.4°   H2                          
E3       98.1°  165.6°   E3                   
E4      -71.0°   18.8°  167.8°   E4            
E5       98.8° -165.9°  -24.9°  158.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3o4ga1 :   (GLY228)  (ILE273)   [view usage] : b.69.7.2 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |Acylamino-acid-releasing enzyme, N-terminal donain |Acylamino-acid-releasing enzyme, N-terminal donain |Aeropyrum pernix [TaxId: 56636]
 d1x9ya2 :   (ASN133)  (LYS177)   [view usage] : d.17.1.4 |Cystatin-like |Cystatin/monellin |Staphopain B, prodomain |Staphopain B, prodomain |Staphylococcus aureus [TaxId: 1280]
 d1avgi_ :     (GLU9)   (GLY57)   [view usage] : b.60.1.3 |Lipocalins |Lipocalins |Thrombin inhibitor |Thrombin inhibitor |Triatomine bug (Triatoma pallidipennis) [TaxId: 30077]
 d2hu5b1 :   (GLY228)  (ILE273)   [view usage] : b.69.7.2 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |Acylamino-acid-releasing enzyme, N-terminal donain |Acylamino-acid-releasing enzyme, N-terminal donain |Aeropyrum pernix [TaxId: 56636]
 d3o4gb1 :   (GLY228)  (ILE273)   [view usage] : b.69.7.2 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |Acylamino-acid-releasing enzyme, N-terminal donain |Acylamino-acid-releasing enzyme, N-terminal donain |Aeropyrum pernix [TaxId: 56636]
 d3o4gc1 :   (GLY228)  (ILE273)   [view usage] : b.69.7.2 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |Acylamino-acid-releasing enzyme, N-terminal donain |Acylamino-acid-releasing enzyme, N-terminal donain |Aeropyrum pernix [TaxId: 56636]
 d2qzpa1 :   (GLY228)  (VAL271)   [view usage] : b.69.7.2 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |Acylamino-acid-releasing enzyme, N-terminal donain |Acylamino-acid-releasing enzyme, N-terminal donain |Aeropyrum pernix [TaxId: 56636]
 d3c0dc_ :     (LEU4)   (GLN44)   [view usage] : b.33.1.3 |ISP domain |ISP domain |NirD-like |NADH-nitrite reductase small subunit NirD |Vibrio parahaemolyticus [TaxId: 670]
 d2basb2 :   (GLU332)  (LEU400)   [view usage] : d.110.6.2 |Profilin-like |Sensory domain-like |YkuI C-terminal domain-like |Hypothetical protein YkuI, C-terminal domain |Bacillus subtilis [TaxId: 1423]
 d3c0da1 :     (LEU4)   (GLN44)   [view usage] : b.33.1.3 |ISP domain |ISP domain |NirD-like |NADH-nitrite reductase small subunit NirD |Vibrio parahaemolyticus [TaxId: 670]
 d1ve6a1 :   (GLY228)  (ILE273)   [view usage] : b.69.7.2 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |Acylamino-acid-releasing enzyme, N-terminal donain |Acylamino-acid-releasing enzyme, N-terminal donain |Aeropyrum pernix [TaxId: 56636]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.69,    b.60,   d.110,    d.17,    b.33