Tableau information
Concept source: d1es7a_ amino acid (a.a.) range (TYR38)(CYS113)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR38) (HIS44) E1
(THR58) (ASN71) H2
(THR82) (LEU92) E3
(VAL99) (ASP105) E4
(GLU109) (CYS113) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -40.3° H2
E3 -148.4° 114.4° E3
E4 18.7° -50.5° 164.7° E4
E5 -13.8° -39.9° -136.5° 32.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1es7a_ : (TYR38) (CYS113) [view usage] : g.17.1.2 |Cystine-knot cytokines |Cystine-knot cytokines |Transforming growth factor (TGF)-beta |Bone morphogenetic protein-2 (BMP-2) |Human (Homo sapiens) [TaxId: 9606]
d2aska_ : (VAL38) (CYS111) [view usage] : g.17.1.0 |Cystine-knot cytokines |Cystine-knot cytokines |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1agqd_ : (PHE66) (CYS134) [view usage] : g.17.1.2 |Cystine-knot cytokines |Cystine-knot cytokines |Transforming growth factor (TGF)-beta |Glial cell-derived neurotrophic factor, GDNF |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3hh2a_ : (ALA40) (CYS108) [view usage] : g.17.1.0 |Cystine-knot cytokines |Cystine-knot cytokines |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1m4ul_ : (TYR62) (CYS138) [view usage] : g.17.1.2 |Cystine-knot cytokines |Cystine-knot cytokines |Transforming growth factor (TGF)-beta |Bone morphogenetic protein-7 (BMP-7) |Human (Homo sapiens) [TaxId: 9606]
d1tfga_ : (ALA41) (CYS111) [view usage] : g.17.1.2 |Cystine-knot cytokines |Cystine-knot cytokines |Transforming growth factor (TGF)-beta |TGF-beta2 |Human (Homo sapiens) [TaxId: 9606]
d1bmpa_ : (ALA64) (CYS138) [view usage] : g.17.1.2 |Cystine-knot cytokines |Cystine-knot cytokines |Transforming growth factor (TGF)-beta |Bone morphogenetic protein-7 (BMP-7) |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
g.17