Tableau information
Concept source: d1g1qa1 amino acid (a.a.) range (TYR48)(TYR118)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR48) (GLY52) E1
(ALA77) (ASN83) H2
(CYS90) (LYS96) E3
(LYS103) (ASP106) E4
(LYS113) (TYR118) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -61.2° H2
E3 133.5° 158.6° E3
E4 -57.6° -7.2° 165.3° E4
E5 -46.5° -102.9° 87.4° -101.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3cfwa1 : (ARG46) (TYR118) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2h2ra_ : (GLY222) (LEU285) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1g1qa1 : (TYR48) (TYR118) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |P-selectin, C-lectin domain |Human (Homo sapiens) [TaxId: 9606]
d2h2rb_ : (GLY222) (LEU285) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1c3ab_ : (ASP264) (GLN324) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Snake coagglutinin beta chain |Habu snake (Trimeresurus flavoviridis), flavocetin-A [TaxId: 88087]
d1esla1 : (TYR48) (TYR118) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |E-selectin, C-lectin domain |Human (Homo sapiens) [TaxId: 9606]
d3c8jd_ : (GLY193) (LYS256) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1wmya_ : (ALA68) (PHE139) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Lectin CEL-I |Cucumaria echinata [TaxId: 40245]
d1e5ui2 : (GLN142) (LYS187) [view usage] : d.169.1.3 |C-type lectin-like |C-type lectin-like |Invasin/intimin cell-adhesion fragment, C-terminal domain |Intimin |Escherichia coli [TaxId: 562]
d1xarb_ : (ARG324) (PRO392) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |DC-SIGNR (DC-SIGN related receptor) |Human (Homo sapiens) [TaxId: 9606]
d1koea_ : (LYS248) (GLU306) [view usage] : d.169.1.5 |C-type lectin-like |C-type lectin-like |Endostatin |Endostatin |Mouse (Mus musculus) [TaxId: 10090]
d3ncxa2 : (ASN889) (CYS932) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Escherichia coli [TaxId: 544404]
d1bnda_ : (TYR54) (ILE115) [view usage] : g.17.1.3 |Cystine-knot cytokines |Cystine-knot cytokines |Neurotrophin |Brain-derived neurotrophic factor, BDNF |Human (Homo sapiens) [TaxId: 9606]
d1bj3b_ : (SER62) (GLN122) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Snake coagglutinin beta chain |Habu snake (Trimeresurus flavoviridis) [TaxId: 88087]
d2vrpb_ : (ASN62) (LYS122) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |automated matches |Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
d3c8ja_ : (GLY193) (LYS256) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.169, g.17