Protein Concepts Dictionary

Tableau information

Concept source:  d1keia_  amino acid (a.a.) range (ASN112)(SER245)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN112)  (GLY117) E1
	  (GLN119)  (GLY123) E2
	  (GLY136)  (THR152) H3
	  (GLU160)  (ASN181) H4
	  (PRO208)  (SER245) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2      168.0°   E2                          
H3      -23.3°  149.8°   H3                   
H4      107.8°  -80.1°  130.1°   H4            
H5       94.8°  -97.0°  107.9°  -40.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4bbna_ :   (PHE699)  (LYS765)   [view usage] : d.148.1.0 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1k9xa_ :   (PRO239)  (ILE319)   [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Thermostable carboxypeptidase 1 |Pyrococcus furiosus [TaxId: 2261]
 d2gbra_ :     (MET1)   (ARG47)   [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3d9wa_ :   (LEU240)  (ARG287)   [view usage] : d.3.1.0 |Cysteine proteinases |Cysteine proteinases |automated matches |automated matches |Nocardia farcinica [TaxId: 37329]
 d1u7xa_ :   (PRO252)  (LEU306)   [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tyrosyl-tRNA synthetase (TyrRS) |Methanococcus jannaschii [TaxId: 2190]
 d2aqxb_ :   (GLY806)  (HIS870)   [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4hjra_ :   (PRO252)  (LEU307)   [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
 d1bqba_ :   (ASN114)  (ALA244)   [view usage] : d.92.1.2 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Thermolysin-like |Aureolysin |Staphylococcus aureus [TaxId: 1280]
 d2jjna_ :    (PRO42)  (ALA129)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Saccharopolyspora erythraea [TaxId: 1836]
 d3s8ra_ :    (ASN18)   (GLU74)   [view usage] : d.153.1.2 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Penicillin acylase, catalytic domain |Cephalosporin acylase |Pseudomonas sp., glutarylamidase [TaxId: 306]
 d3d6ua_ :   (PRO252)  (LEU307)   [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
 d3dr4d_ :   (ASP176)  (LYS264)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Caulobacter crescentus [TaxId: 190650]
 d1j36a_ :   (SER339)  (GLY415)   [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme, ACE |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1zvda_ :   (PHE549)  (ILE625)   [view usage] : d.148.1.0 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4hjrb_ :   (PRO252)  (LEU306)   [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
 d2m9aa_ :    (PRO41)   (VAL98)   [view usage] : g.37.1.0 |beta-beta-alpha zinc fingers |beta-beta-alpha zinc fingers |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2xbfa_ :   (PHE700)  (LYS766)   [view usage] : d.148.1.0 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1keia_ :   (ASN112)  (SER245)   [view usage] : d.92.1.2 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Thermolysin-like |Thermolysin |Bacillus thermoproteolyticus [TaxId: 1427]
 d1keha_ :    (ASN18)   (GLY84)   [view usage] : d.153.1.2 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Penicillin acylase, catalytic domain |Cephalosporin acylase |Brevundimonas diminuta [TaxId: 293]
 d3jw0c_ :   (ILE757)  (LYS821)   [view usage] : d.148.1.0 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1zh0a_ :   (PRO252)  (LEU307)   [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
 d2c6fb_ :   (ALA332)  (LYS407)   [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1vnha_ :   (ILE434)  (GLY567)   [view usage] : a.111.1.3 |Acid phosphatase/Vanadium-dependent haloperoxidase |Acid phosphatase/Vanadium-dependent haloperoxidase |Chloroperoxidase |Chloroperoxidase |Curvularia inaequalis [TaxId: 38902]
 d1jyoe_ :    (LYS37)  (ILE105)   [view usage] : d.184.1.2 |Non-globular alpha+beta subunits of globular proteins |Non-globular alpha+beta subunits of globular proteins |Virulence effector SptP domain |Virulence effector SptP domain |Salmonella typhimurium [TaxId: 90371]
 d4b52a_ :   (ASN105)  (ALA233)   [view usage] : d.92.1.2 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Thermolysin-like |automated matches |Paenibacillus polymyxa [TaxId: 1406]
 d3d0ga_ :   (THR347)  (GLY422)   [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme 2, ACE2 |Paguma larvata
 d3s8rb_ :    (ASN18)   (GLY84)   [view usage] : d.153.1.2 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Penicillin acylase, catalytic domain |Cephalosporin acylase |Pseudomonas sp., glutarylamidase [TaxId: 306]
 d1c4zd_ :    (PRO65)  (LYS146)   [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |Ubiquitin conjugating enzyme, UBC |Human (Homo sapiens), ubch7 [TaxId: 9606]
 d1vnca_ :   (ILE434)  (GLY567)   [view usage] : a.111.1.3 |Acid phosphatase/Vanadium-dependent haloperoxidase |Acid phosphatase/Vanadium-dependent haloperoxidase |Chloroperoxidase |Chloroperoxidase |Curvularia inaequalis [TaxId: 38902]
 d2a2pa1 :    (GLU81)  (GLU141)   [view usage] : c.47.1.23 |Thioredoxin fold |Thioredoxin-like |Selenoprotein W-related |Selenoprotein M |Mouse (Mus musculus) [TaxId: 10090]
 d2gbrc_ :     (MET1)   (ARG47)   [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4e57a_ :    (GLU21)   (GLU76)   [view usage] : d.153.1.2 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Penicillin acylase, catalytic domain |automated matches |Pseudomonas sp. [TaxId: 81841]
 d3diha_ :    (TYR64)  (VAL118)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Vipera ammodytes [TaxId: 8705]
 d3scka_ :   (THR347)  (GLY422)   [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme 2, ACE2 |Paguma larvata
 d1r42a_ :   (THR347)  (ALA412)   [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme 2, ACE2 |Human (Homo sapiens) [TaxId: 9606]
 d2ag6a_ :   (PRO252)  (LEU307)   [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tyrosyl-tRNA synthetase (TyrRS) |Methanococcus jannaschii [TaxId: 2190]
 d1jyof_ :    (LYS37)  (ILE105)   [view usage] : d.184.1.2 |Non-globular alpha+beta subunits of globular proteins |Non-globular alpha+beta subunits of globular proteins |Virulence effector SptP domain |Virulence effector SptP domain |Salmonella typhimurium [TaxId: 90371]
 d2nqwa1 :     (PRO5)   (VAL43)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Hypothetical protein PG0272 |Porphyromonas gingivalis [TaxId: 837]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.67,   a.104,    c.26,    d.92,    c.47,   d.153,     d.3,    d.20,   d.143,   d.145,    d.15,   a.111,   d.148,   a.133,    g.37,   d.184