Tableau information
Concept source: d2pr6b_ amino acid (a.a.) range (VAL25)(ASN84)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL25) (ASP31) E1
(VAL40) (GLN44) E2
(GLN44) (THR50) H3
(GLU53) (LEU58) H4
(PRO72) (ASN84) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 167.1° E2
H3 -109.3° -74.0° H3
H4 -38.9° 154.0° 99.1° H4
H5 -53.3° 123.8° -162.2° -65.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4hoib_ : (THR28) (TYR90) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4a72b_ : (ASP282) (GLY343) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Chromobacterium violaceum [TaxId: 536]
d1v9za_ : (GLY32) (GLY87) [view usage] : d.110.3.2 |Profilin-like |PYP-like sensor domain (PAS domain) |Heme-binding PAS domain |Direct oxygen sensor protein, DOS |Escherichia coli [TaxId: 562]
d1vb6a_ : (GLY32) (GLY87) [view usage] : d.110.3.2 |Profilin-like |PYP-like sensor domain (PAS domain) |Heme-binding PAS domain |Direct oxygen sensor protein, DOS |Escherichia coli [TaxId: 562]
d2kf2a_ : (GLN89) (HIS162) [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Streptomyces coelicolor [TaxId: 100226]
d1gswa_ : (PHE28) (PRO73) [view usage] : d.110.3.1 |Profilin-like |PYP-like sensor domain (PAS domain) |PYP-like |Photoactive yellow protein, PYP |Methylophilus methylotrophus, strain w3a1 [TaxId: 17]
d4h6ja_ : (THR241) (SER284) [view usage] : d.110.3.7 |Profilin-like |PYP-like sensor domain (PAS domain) |Hypoxia-inducible factor Hif2a, C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1s66u_ : (GLY32) (GLY87) [view usage] : d.110.3.2 |Profilin-like |PYP-like sensor domain (PAS domain) |Heme-binding PAS domain |Direct oxygen sensor protein, DOS |Escherichia coli [TaxId: 562]
d4llob_ : (ASN29) (TYR90) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2gj3b_ : (ILE36) (LYS93) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Azotobacter vinelandii [TaxId: 354]
d3nx3b_ : (ASP242) (LYS300) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d2a24b_ : (THR10) (LYS68) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2gj3a_ : (ILE36) (LYS93) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Azotobacter vinelandii [TaxId: 354]
d2b02a_ : (PHE363) (GLN405) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2i9va_ : (PHE28) (PRO73) [view usage] : d.110.3.1 |Profilin-like |PYP-like sensor domain (PAS domain) |PYP-like |Photoactive yellow protein, PYP |Methylophilus methylotrophus, strain w3a1 [TaxId: 17]
d4eq1a_ : (THR361) (GLN405) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2pr6b_ : (VAL25) (ASN84) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1f9ia_ : (PHE28) (PRO73) [view usage] : d.110.3.1 |Profilin-like |PYP-like sensor domain (PAS domain) |PYP-like |Photoactive yellow protein, PYP |Methylophilus methylotrophus, strain w3a1 [TaxId: 17]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, d.129, d.110