Protein Concepts Dictionary

Tableau information

Concept source:  d1jeha3  amino acid (a.a.) range (ILE359)(GLN403)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ILE359)  (SER365) E1
	  (GLU368)  (GLY373) E2
	  (THR375)  (GLY383) H3
	  (TYR386)  (PRO392) E4
	  (ASN396)  (GLN403) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2      165.0°   E2                          
H3      145.3°  -19.9°   H3                   
E4      -28.9°  162.9° -167.4°   E4            
H5      -19.6° -164.8° -151.4°  -31.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1feaa3 :   (VAL361)  (SER403)   [view usage] : d.87.1.1 |CO dehydrogenase flavoprotein C-domain-like |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |Trypanothione reductase |Crithidia fasciculata [TaxId: 5656]
 d1onfa3 :   (ILE380)  (TYR424)   [view usage] : d.87.1.1 |CO dehydrogenase flavoprotein C-domain-like |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |Glutathione reductase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d1lvla3 :   (ILE339)  (GLY377)   [view usage] : d.87.1.1 |CO dehydrogenase flavoprotein C-domain-like |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |Dihydrolipoamide dehydrogenase |Pseudomonas putida [TaxId: 303]
 d1gera3 :   (ILE339)  (THR383)   [view usage] : d.87.1.1 |CO dehydrogenase flavoprotein C-domain-like |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |Glutathione reductase |Escherichia coli [TaxId: 562]
 d2aqxa_ :   (GLY713)  (LYS758)   [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1feab3 :   (VAL361)  (SER403)   [view usage] : d.87.1.1 |CO dehydrogenase flavoprotein C-domain-like |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |Trypanothione reductase |Crithidia fasciculata [TaxId: 5656]
 d1jeha3 :   (ILE359)  (GLN403)   [view usage] : d.87.1.1 |CO dehydrogenase flavoprotein C-domain-like |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |Dihydrolipoamide dehydrogenase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2aqxb_ :   (GLY713)  (LYS757)   [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1bwca3 :   (ILE367)  (THR411)   [view usage] : d.87.1.1 |CO dehydrogenase flavoprotein C-domain-like |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |Glutathione reductase |Human (Homo sapiens) [TaxId: 9606]
 d1p85g_ :    (VAL56)  (LYS112)   [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |70S ribosome functional complex |Escherichia coli [TaxId: 562]
 d1be3a2 :   (GLY238)  (LYS302)   [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 1 |Cow (Bos taurus) [TaxId: 9913]
 d3lada3 :   (ILE352)  (ALA395)   [view usage] : d.87.1.1 |CO dehydrogenase flavoprotein C-domain-like |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |Dihydrolipoamide dehydrogenase |Azotobacter vinelandii [TaxId: 354]
 d1lpfa3 :   (LEU351)  (ALA395)   [view usage] : d.87.1.1 |CO dehydrogenase flavoprotein C-domain-like |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |Dihydrolipoamide dehydrogenase |Pseudomonas fluorescens [TaxId: 294]
 d1w2fa_ :   (GLY236)  (GLU280)   [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A |Human (Homo sapiens) [TaxId: 9606]
 d1mo9a3 :   (TYR387)  (MET438)   [view usage] : d.87.1.1 |CO dehydrogenase flavoprotein C-domain-like |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase |Xanthobacter sp., py2 [TaxId: 35809]
 d1bhya3 :   (ARG472)  (ASN517)   [view usage] : d.87.1.1 |CO dehydrogenase flavoprotein C-domain-like |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |Dihydrolipoamide dehydrogenase |Neisseria meningitidis [TaxId: 487]
 d1grha_ :   (ILE367)  (THR411)   [view usage] : i.12.1.1 |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Glutathione reductase |Human (Homo sapiens) [TaxId: 9606]
 d1w2ca_ :   (GLY236)  (GLU280)   [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A |Human (Homo sapiens) [TaxId: 9606]
 d2a98a_ :   (GLY458)  (ARG503)   [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ojta3 :   (ARG472)  (ASN517)   [view usage] : d.87.1.1 |CO dehydrogenase flavoprotein C-domain-like |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |Dihydrolipoamide dehydrogenase |Neisseria meningitidis [TaxId: 487]
 d1t8qd_ :   (GLU119)  (GLY182)   [view usage] : c.1.18.3 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Glycerophosphoryl diester phosphodiesterase |Glycerophosphodiester phosphodiesterase GlpQ |Escherichia coli [TaxId: 562]
 d1dxla3 :   (VAL351)  (ASP395)   [view usage] : d.87.1.1 |CO dehydrogenase flavoprotein C-domain-like |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |Dihydrolipoamide dehydrogenase |Pea (Pisum sativum) [TaxId: 3888]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1,     i.1,   d.185,   d.143,    d.87,    i.12