Protein Concepts Dictionary

Tableau information

Concept source:  d3moya_  amino acid (a.a.) range (THR6)(LEU75)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (THR6)   (ARG11) E1
	   (GLY15)   (LEU21) E2
	   (ASN31)   (ASP48) H3
	   (GLY52)   (GLY58) E4
	   (ILE69)   (LEU75) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2      165.7°   E2                          
H3      -14.1°  177.5°   H3                   
E4      145.6°  -20.1°  159.4°   E4            
H5     -126.7°   66.6° -114.6°  -85.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1uiya_ :     (MSE1)   (ARG67)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Enoyl-CoA hydratase (crotonase) |Thermus thermophilus [TaxId: 274]
 d3r0oa_ :    (ALA12)   (GLY81)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
 d1duba_ :    (ILE36)  (GLN104)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Enoyl-CoA hydratase (crotonase) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2vsud_ :    (THR10)   (GLY82)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d3r0ob_ :    (ALA12)   (GLY81)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
 d2j5ii_ :    (THR10)   (GLY82)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d3peaa_ :     (PHE4)   (CYS94)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d3trrb_ :     (GLU4)   (GLY72)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
 d2vsuc_ :    (THR10)   (GLY82)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d2vsub_ :    (VAL11)   (GLY82)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d4fzwb_ :     (ILE5)   (LYS71)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3h81a_ :    (ILE27)   (LEU94)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d4k3wb_ :     (THR9)   (GLN80)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Marinobacter aquaeolei [TaxId: 351348]
 d3qxza_ :     (GLU4)   (ALA69)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
 d3trrd_ :     (GLU4)   (GLY72)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
 d3moya_ :     (THR6)   (LEU75)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4mi2a_ :     (ALA8)   (ASP81)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
 d3r9ta_ :     (GLY6)   (ARG75)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 1770]
 d2j5ic_ :    (THR10)   (GLY82)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d2j5ik_ :    (THR10)   (GLY82)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d4fzwa_ :     (GLU3)   (LYS71)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1sg4b_ :     (ARG4)   (CYS72)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) |Human (Homo sapiens) [TaxId: 9606]
 d2gtrb_ :     (ASP6)   (ASP78)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2qq3c_ :     (SER6)   (ASP74)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Geobacillus kaustophilus [TaxId: 1462]
 d2j5ig_ :    (THR10)   (GLY82)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d2j5ia_ :    (VAL11)   (GLY82)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d4olqb_ :     (ARG6)   (PHE70)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Hyphomonas neptunium [TaxId: 228405]
 d2vsuf_ :    (THR10)   (GLY82)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d3r9sa_ :     (GLY6)   (ARG75)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
 d2fbma1 :   (ASP285)  (ASN357)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Chromodomain protein CDY1, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d2vssf_ :    (THR10)   (GLY82)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d3swxb_ :     (LEU7)   (GLY77)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 36809]
 d4jfca_ :     (GLY3)   (ASN72)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Polaromonas sp. [TaxId: 296591]
 d1ey3a_ :    (TYR35)  (GLN104)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Enoyl-CoA hydratase (crotonase) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2hw5a_ :    (TYR35)  (LEU106)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4k29a_ :     (LYS5)   (ALA73)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Xanthobacter autotrophicus [TaxId: 78245]
 d3trra_ :     (GLU4)   (GLY72)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
 d2j5ih_ :    (THR10)   (GLY82)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d1nzyb_ :     (ILE5)   (PRO70)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |4-Chlorobenzoyl-CoA dehalogenase |Pseudomonas sp., strain CBS-3 [TaxId: 306]
 d3gdla_ :   (ARG186)  (ARG261)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1dubb_ :    (TYR35)  (GLN104)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Enoyl-CoA hydratase (crotonase) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4k29b_ :     (LYS5)   (ALA73)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Xanthobacter autotrophicus [TaxId: 78245]
 d3qxib_ :    (GLU11)   (GLY79)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1,    c.14