Tableau information
Concept source: d4f82b_ amino acid (a.a.) range (ALA11)(HIS66)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA11) (PHE16) E1
(GLY27) (SER32) E2
(SER32) (ALA38) H3
(VAL42) (PRO48) E4
(VAL60) (HIS66) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 160.7° E2
H3 77.2° 83.6° H3
E4 83.6° -113.2° 142.5° E4
H5 -79.0° 83.0° 25.6° -161.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1oc3a_ : (VAL12) (THR50) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Peroxiredoxin 5 |Human (Homo sapiens) [TaxId: 9606]
d2b7kb_ : (GLY117) (GLY171) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thioredoxin-like protein Sco1 (YpmQ), soluble domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1b0ua_ : (ILE70) (MET115) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |ATP-binding subunit of the histidine permease |Salmonella typhimurium [TaxId: 90371]
d1ta4a2 : (ARG272) (ARG314) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Aspartate beta-semialdehyde dehydrogenase |Haemophilus influenzae [TaxId: 727]
d4nmua_ : (LYS10) (GLU50) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1urma_ : (VAL12) (THR50) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Peroxiredoxin 5 |Human (Homo sapiens) [TaxId: 9606]
d1ezka_ : (GLU12) (PHE46) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin I |Crithidia fasciculata [TaxId: 5656]
d2wfca_ : (VAL39) (THR77) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Arenicola marina [TaxId: 6344]
d4hqza_ : (LYS47) (ALA96) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d1o8xa_ : (GLU12) (PHE46) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin I |Crithidia fasciculata [TaxId: 5656]
d1h4oa_ : (VAL12) (SER48) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Peroxiredoxin 5 |Human (Homo sapiens) [TaxId: 9606]
d2vl9a_ : (VAL12) (GLU57) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4f82b_ : (ALA11) (HIS66) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2gqka_ : (PRO139) (THR191) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2b7jb_ : (GLY117) (GLY171) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thioredoxin-like protein Sco1 (YpmQ), soluble domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1o7ua_ : (GLU12) (PHE57) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin I |Crithidia fasciculata [TaxId: 5656]
d4f82a_ : (ALA11) (HIS66) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1cqia2 : (GLY241) (LYS284) [view usage] : c.23.4.1 |Flavodoxin-like |Succinyl-CoA synthetase domains |Succinyl-CoA synthetase domains |Succinyl-CoA synthetase, alpha-chain, C-terminal domain |Escherichia coli [TaxId: 562]
d1mb4a2 : (ARG272) (GLU315) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Aspartate beta-semialdehyde dehydrogenase |Vibrio cholerae [TaxId: 666]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.23, c.37, c.47, d.81