Protein Concepts Dictionary

Tableau information

Concept source:  d1mdud_  amino acid (a.a.) range (GLY41)(TYR109)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY41)   (GLN51) E1
	   (GLN58)   (ASN67) E2
	   (SER70)   (ASN89) H3
	   (VAL93)   (VAL98) E4
	  (SER103)  (TYR109) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2      165.0°   E2                          
H3      -19.0°  176.0°   H3                   
E4      148.3°  -16.9°  166.8°   E4            
H5       83.7°  -94.1°   85.9°  -87.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1d0na5 :   (ASP565)  (ALA617)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Horse (Equus caballus) [TaxId: 9796]
 d3fg6a1 :   (ASP423)  (LEU485)   [view usage] : d.109.1.0 |Gelsolin-like |Actin depolymerizing proteins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ffna4 :   (ASP445)  (LEU511)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d3ffkd1 :    (TYR68)  (TYR133)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d1h1vg2 :   (ASP565)  (ALA617)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d3ffna1 :    (GLY65)  (GLY132)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d1j72a1 :    (TYR48)  (SER108)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Macrophage capping protein Cap G |Human (Homo sapiens) [TaxId: 9606]
 d1npha3 :   (ASP670)  (GLY731)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d1d0na4 :   (ASP445)  (LEU511)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Horse (Equus caballus) [TaxId: 9796]
 d1p8xa1 :   (ASP445)  (LEU511)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d1h1vg3 :   (ASP670)  (LEU734)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d3ffka2 :   (ASP187)  (LEU247)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d1yagg_ :    (VAL45)  (TYR109)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d3tu5b_ :    (VAL45)  (TYR109)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1p8zg_ :    (VAL69)  (TYR133)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d4pkhj_ :    (GLY92)  (TYR160)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4ecpa_ :    (VAL77)  (ALA159)   [view usage] : b.40.5.0 |OB-fold |Inorganic pyrophosphatase |automated matches |automated matches |Mycobacterium leprae [TaxId: 1769]
 d4ecpb_ :    (VAL77)  (ALA159)   [view usage] : b.40.5.0 |OB-fold |Inorganic pyrophosphatase |automated matches |automated matches |Mycobacterium leprae [TaxId: 1769]
 d1jhwa2 :   (ASP163)  (LEU223)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Macrophage capping protein Cap G |Human (Homo sapiens) [TaxId: 9606]
 d4cbug_ :    (VAL69)  (TYR133)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4pkhe_ :    (GLY92)  (GLY159)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1npha2 :   (ALA566)  (GLY619)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d3fg6f3 :   (ASP644)  (GLY705)   [view usage] : d.109.1.0 |Gelsolin-like |Actin depolymerizing proteins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3fg6c3 :   (ASP644)  (GLY705)   [view usage] : d.109.1.0 |Gelsolin-like |Actin depolymerizing proteins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.40,   d.109