Tableau information
Concept source: d4mbxd_ amino acid (a.a.) range (THR84)(GLY156)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR84) (LYS94) E1
(MET109) (VAL119) E2
(GLY121) (ASN127) H3
(SER139) (VAL145) E4
(THR148) (GLY156) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 138.0° E2
H3 161.0° -23.9° H3
E4 -55.8° -164.7° 143.2° E4
E5 -19.4° 156.9° 172.1° 37.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4mbzj_ : (THR84) (GLY156) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4mbxf_ : (THR84) (GLY156) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4mbxa_ : (THR84) (GLY156) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4mbxd_ : (THR84) (GLY156) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4mbzd_ : (THR84) (GLY156) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d3bwqb_ : (TYR88) (GLY155) [view usage] : b.121.6.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |automated matches |automated matches |Simian virus 40 [TaxId: 10633]
d1vpna_ : (TRP98) (GLY168) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |Polyomavirus coat proteins |Murine polyomavirus, strain small-plaque 16 [TaxId: 10634]
d1vpnb_ : (TRP98) (GLY168) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |Polyomavirus coat proteins |Murine polyomavirus, strain small-plaque 16 [TaxId: 10634]
d3paja1 : (SER55) (PRO98) [view usage] : d.41.2.0 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
d4mbxb_ : (THR84) (GLY156) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.121, d.41