Tableau information
Concept source: d4posd_ amino acid (a.a.) range (GLY32)(ASN84)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY32) (PRO42) E1
(ALA44) (MET56) E2
(ASP63) (TYR68) H3
(ASP71) (SER77) E4
(SER80) (ASN84) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -117.5° E2
H3 -98.8° 112.7° H3
E4 -165.2° 64.8° -67.9° E4
E5 24.6° 125.3° -111.5° -166.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4mbzj_ : (VAL35) (ASN81) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4mbxf_ : (VAL35) (ASN81) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4poqj_ : (GLY32) (ASN84) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4poqb_ : (VAL33) (ASN84) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4mbxa_ : (VAL35) (ASN81) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4fmjr_ : (GLU41) (ILE94) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Merkel cell polyomavirus [TaxId: 493803]
d4fmhb_ : (VAL40) (ILE94) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Merkel cell polyomavirus [TaxId: 493803]
d1cn3a_ : (MET34) (GLY91) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |Polyomavirus coat proteins |Murine polyomavirus, strain small-plaque 16 [TaxId: 10634]
d1vpna_ : (LEU37) (GLY91) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |Polyomavirus coat proteins |Murine polyomavirus, strain small-plaque 16 [TaxId: 10634]
d4posd_ : (GLY32) (ASN84) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4poqh_ : (GLY32) (ASN84) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4poqi_ : (GLY32) (ASN84) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d1vpnb_ : (GLY32) (GLY91) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |Polyomavirus coat proteins |Murine polyomavirus, strain small-plaque 16 [TaxId: 10634]
d4fmib_ : (GLU41) (ILE94) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Merkel cell polyomavirus [TaxId: 493803]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.121