Tableau information
Concept source: d3r9tb_ amino acid (a.a.) range (PRO99)(GLY131)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO99) (ASN105) E1
(GLY106) (GLY110) E2
(GLY110) (SER119) H3
(ASP120) (GLU126) E4
(ARG127) (GLY131) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 111.1° E2
H3 -149.0° -96.0° H3
E4 -16.2° -125.3° -132.9° E4
E5 115.4° 4.4° -91.6° -129.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2bzra1 : (PRO182) (PHE215) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2iv7a1 : (ILE2) (GLY43) [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Lipopolysaccharide core biosynthesis protein RfaG |Escherichia coli [TaxId: 562]
d3qxza_ : (PRO96) (ILE129) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d1tr9a_ : (ALA167) (HIS212) [view usage] : c.1.8.7 |TIM beta/alpha-barrel |(Trans)glycosidases |NagZ-like |Beta-hexosaminidase NagZ |Vibrio cholerae [TaxId: 666]
d3r9ta_ : (PRO99) (GLY131) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 1770]
d3ff6a1 : (VAL1926) (ILE1958) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ds9a_ : (GLU97) (ASN129) [view usage] : c.10.3.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |Outer arm dynein light chain 1 |Outer arm dynein light chain 1 |Outer arm dynein light chain 1 |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
d2o8ra4 : (ARG534) (LEU573) [view usage] : d.136.1.4 |Phospholipase D/nuclease |Phospholipase D/nuclease |Polyphosphate kinase C-terminal domain |Polyphosphate kinase, PPK |Porphyromonas gingivalis [TaxId: 837]
d2vx2a_ : (PRO141) (THR174) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3r9sa_ : (PRO99) (GLY131) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
d1y65a_ : (ALA167) (HIS212) [view usage] : c.1.8.7 |TIM beta/alpha-barrel |(Trans)glycosidases |NagZ-like |Beta-hexosaminidase NagZ |Vibrio cholerae [TaxId: 666]
d1adea_ : (ASN63) (ASP108) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Adenylosuccinate synthetase, PurA |Escherichia coli [TaxId: 562]
d3eyea_ : (GLY115) (ILE156) [view usage] : c.38.1.0 |PTS IIb component |PTS IIb component |automated matches |automated matches |Escherichia coli O157:H7 [TaxId: 83334]
d2nvva2 : (ALA278) (SER310) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Porphyromonas gingivalis [TaxId: 242619]
d2iw1a_ : (ILE2) (GLY43) [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Lipopolysaccharide core biosynthesis protein RfaG |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.10, c.124, c.14, c.37, c.87, c.38, d.136