Tableau information
Concept source: d1ibfa_ amino acid (a.a.) range (ALA94)(GLN151)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA94) (SER98) E1
(GLY101) (ARG111) E2
(THR113) (LYS118) H3
(GLY119) (HIS125) E4
(VAL145) (GLN151) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 159.9° E2
H3 -86.5° 111.1° H3
E4 -57.4° 127.1° 95.3° E4
E5 117.1° -52.4° -98.8° 164.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3jtba_ : (ILE81) (LEU127) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2aqpa_ : (ALA128) (LYS186) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Neisseria meningitidis [TaxId: 487]
d2aqna_ : (ALA128) (LYS186) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Neisseria meningitidis [TaxId: 487]
d1dyza_ : (ILE81) (LEU127) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Azurin |Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
d1nwba_ : (HIS61) (PRO101) [view usage] : b.124.1.1 |HesB-like domain |HesB-like domain |HesB-like domain |Hypothetical protein Aq_1857 |Aquifex aeolicus [TaxId: 63363]
d1eqwc_ : (LEU85) (VAL146) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Salmonella typhimurium [TaxId: 90371]
d1ibha_ : (LEU95) (VAL149) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Photobacterium leiognathi [TaxId: 553611]
d1do5a_ : (GLY169) (ILE229) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Copper chaperone for superoxide dismutase, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2watb_ : (GLU1838) (LYS1886) [view usage] : d.150.1.0 |4'-phosphopantetheinyl transferase |4'-phosphopantetheinyl transferase |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1f15c_ : (PRO149) (GLN208) [view usage] : b.121.4.5 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Bromoviridae-like VP |Cucumovirus coat protein |CMV (Cucumber mosaic virus), strain fny [TaxId: 12305]
d1bzoa_ : (ALA84) (VAL146) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Photobacterium leiognathi [TaxId: 553611]
d2huha1 : (GLY140) (LEU187) [view usage] : b.7.5.1 |C2 domain-like |Smr-associated domain-like |Smr-associated domain |Putative DNA mismatch repair protein BT2179 |Bacteroides thetaiotaomicron [TaxId: 818]
d2yrba1 : (GLU641) (PHE700) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |Fantom |Human (Homo sapiens) [TaxId: 9606]
d2aqsa_ : (ALA128) (LYS186) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Neisseria meningitidis [TaxId: 487]
d2aqqa_ : (ALA128) (LYS186) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Neisseria meningitidis [TaxId: 487]
d2apsa_ : (ALA109) (LYS167) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Actinobacillus pleuropneumoniae [TaxId: 715]
d2q3za2 : (LEU530) (GLU585) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), tissue isozyme [TaxId: 9606]
d1yaic_ : (ALA94) (VAL149) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Photobacterium leiognathi [TaxId: 553611]
d2aqra_ : (ALA128) (LYS186) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Neisseria meningitidis [TaxId: 487]
d1jaja_ : (GLN25) (GLY82) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase X |African swine fever virus [TaxId: 10497]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.121, b.6, b.1, d.150, b.7, d.218, b.124