Tableau information
Concept source: d1kb9a1 amino acid (a.a.) range (ALA27)(GLY90)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA27) (SER33) E1
(ILE36) (GLU41) E2
(HIS47) (GLY56) E3
(GLY68) (SER79) H4
(SER79) (GLY90) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 174.2° E2
E3 -47.4° 138.0° E3
H4 100.4° -74.7° 146.4° H4
H5 114.7° -59.5° 147.3° -44.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3h1ho1 : (GLY20) (ARG70) [view usage] : d.185.1.0 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d2gy9i1 : (GLN4) (VAL47) [view usage] : d.14.1.1 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Translational machinery components |Ribosomal protein S9 |Escherichia coli [TaxId: 562]
d1ezva1 : (ALA27) (GLY89) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1nhja2 : (GLU119) (ARG182) [view usage] : d.122.1.2 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |DNA gyrase/MutL, N-terminal domain |DNA mismatch repair protein MutL |Escherichia coli [TaxId: 562]
d3k6ua_ : (LYS276) (GLY328) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Methanosarcina acetivorans [TaxId: 2214]
d3l70a1 : (THR14) (GLY83) [view usage] : d.185.1.0 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d3cg3a_ : (ARG262) (TYR315) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d1ui7a1 : (VAL484) (ALA534) [view usage] : b.30.2.1 |Supersandwich |Amine oxidase catalytic domain |Amine oxidase catalytic domain |Copper amine oxidase, domain 3 |Arthrobacter globiformis [TaxId: 1665]
d1p30a2 : (PHE797) (SER896) [view usage] : b.121.2.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |Adenovirus hexon |Adenovirus hexon |Human adenovirus type 5 [TaxId: 28285]
d1q2la2 : (ASP736) (TYR788) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Protease III |Escherichia coli [TaxId: 562]
d1hr6a1 : (ASN18) (ALA68) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Mitochondrial processing peptidase (MPP) alpha chain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1b62a2 : (GLU119) (ARG182) [view usage] : d.122.1.2 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |DNA gyrase/MutL, N-terminal domain |DNA mismatch repair protein MutL |Escherichia coli [TaxId: 562]
d1bccb1 : (LEU24) (GLY93) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 2 |Chicken (Gallus gallus) [TaxId: 9031]
d1be3b1 : (ASP23) (GLY93) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 2 |Cow (Bos taurus) [TaxId: 9913]
d4adba_ : (VAL26) (PHE71) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli [TaxId: 511693]
d1b63a2 : (GLU119) (ARG182) [view usage] : d.122.1.2 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |DNA gyrase/MutL, N-terminal domain |DNA mismatch repair protein MutL |Escherichia coli [TaxId: 562]
d2xzmi_ : (VAL9) (GLY58) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d3h1ha1 : (THR14) (GLY83) [view usage] : d.185.1.0 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d2onra_ : (LYS267) (GLY319) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Molybdate-binding protein, ModA |Archaeoglobus fulgidus [TaxId: 2234]
d1hr6c1 : (ASN18) (ALA68) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Mitochondrial processing peptidase (MPP) alpha chain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2hkja3 : (GLU152) (ILE196) [view usage] : d.122.1.2 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |DNA gyrase/MutL, N-terminal domain |Topoisomerase VI-B subunit |Sulfolobus shibatae [TaxId: 2286]
d2fjub3 : (LEU47) (THR98) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Phospholipase C-beta-2 |Human (Homo sapiens) [TaxId: 9606]
d4ocea_ : (GLN8) (LYS41) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Proteus mirabilis [TaxId: 529507]
d3h1hb1 : (LEU24) (ARG70) [view usage] : d.185.1.0 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1kb9a1 : (ALA27) (GLY90) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3wu4b_ : (GLN597) (GLY653) [view usage] : d.14.1.10 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |ATP-dependent protease Lon (La), catalytic domain |ATP-dependent protease Lon (La), catalytic domain |Escherichia coli [TaxId: 562]
d2onke1 : (LYS267) (GLY319) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Molybdate-binding protein, ModA |Archaeoglobus fulgidus [TaxId: 2234]
d2whya_ : (LYS20) (ALA78) [view usage] : c.92.2.4 |Chelatase-like |"Helical backbone" metal receptor |TM0189-like |automated matches |Bacillus subtilis [TaxId: 1423]
d1l0lb1 : (ASP23) (ARG70) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 2 |Cow (Bos taurus) [TaxId: 9913]
d1be3a1 : (GLU13) (GLY83) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 1 |Cow (Bos taurus) [TaxId: 9913]
d2onkj_ : (LYS267) (GLY319) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Molybdate-binding protein, ModA |Archaeoglobus fulgidus [TaxId: 2234]
d3wu6f_ : (ARG594) (GLY653) [view usage] : d.14.1.10 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |ATP-dependent protease Lon (La), catalytic domain |ATP-dependent protease Lon (La), catalytic domain |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, c.94, i.1, b.30, c.92, d.122, c.47, d.185, d.14, b.121, b.55