Tableau information
Concept source: d2j3wa_ amino acid (a.a.) range (VAL64)(LYS136)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL64) (ASN68) E1
(PHE71) (THR77) E2
(MET81) (HIS87) E3
(ASP93) (MET111) H4
(SER123) (LYS136) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 148.5° E2
E3 -37.7° 161.2° E3
H4 113.7° -35.5° 146.8° H4
H5 -81.7° 128.1° -45.5° 163.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3k5ma2 : (CYS599) (GLY676) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |automated matches |Escherichia coli [TaxId: 562]
d4k2hd_ : (GLY134) (TYR182) [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Salmonella enterica [TaxId: 99287]
d1a73a_ : (GLY53) (CYS125) [view usage] : d.4.1.3 |His-Me finger endonucleases |His-Me finger endonucleases |Intron-encoded homing endonucleases |Intron-encoded homing endonuclease I-PpoI |Slime mold (Physarum polycephalum) [TaxId: 5791]
d3taga2 : (GLY699) (GLU770) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d3ldsa2 : (GLY699) (LEU774) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d4k8za2 : (LYS584) (TYR653) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |automated matches |Thermococcus kodakarensis [TaxId: 69014]
d1cyqa_ : (GLY53) (CYS125) [view usage] : d.4.1.3 |His-Me finger endonucleases |His-Me finger endonucleases |Intron-encoded homing endonucleases |Intron-encoded homing endonuclease I-PpoI |Slime mold (Physarum polycephalum) [TaxId: 5791]
d2l9ca_ : (GLY105) (ILE168) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1mb1a_ : (ASN3) (THR62) [view usage] : d.34.1.1 |DNA-binding domain of Mlu1-box binding protein MBP1 |DNA-binding domain of Mlu1-box binding protein MBP1 |DNA-binding domain of Mlu1-box binding protein MBP1 |DNA-binding domain of Mlu1-box binding protein MBP1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1wuea2 : (SER1005) (GLU1092) [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |N-acylamino acid racemase |Enterococcus faecalis [TaxId: 1351]
d1j42a_ : (HIS138) (VAL186) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |DJ-1 |Human (Homo sapiens) [TaxId: 9606]
d1mhsa_ : (LEU446) (GLY509) [view usage] : i.18.1.1 |Membrane ion ATPase |Membrane ion ATPase |Membrane ion ATPase |Proton ATPase |Fungus (Neurospora crassa) [TaxId: 5141]
d1o0xa_ : (ALA71) (GLN157) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Methionine aminopeptidase |Thermotoga maritima [TaxId: 2336]
d2o6ma_ : (GLY53) (CYS125) [view usage] : d.4.1.3 |His-Me finger endonucleases |His-Me finger endonucleases |Intron-encoded homing endonucleases |Intron-encoded homing endonuclease I-PpoI |Slime mold (Physarum polycephalum) [TaxId: 5791]
d3ewjb_ : (LYS367) (MET449) [view usage] : d.92.1.10 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d2nn5a1 : (LYS75) (GLU159) [view usage] : d.129.3.5 |TBP-like |Bet v1-like |AHSA1 domain |Hypothetical protein EF2215 |Enterococcus faecalis [TaxId: 1351]
d1evwa_ : (GLY53) (CYS125) [view usage] : d.4.1.3 |His-Me finger endonucleases |His-Me finger endonucleases |Intron-encoded homing endonucleases |Intron-encoded homing endonuclease I-PpoI |Slime mold (Physarum polycephalum) [TaxId: 5791]
d1x2ga1 : (SER252) (PHE318) [view usage] : d.224.1.3 |SufE/NifU |SufE/NifU |SP1160 C-terminal domain-like |Two-domain LplA, C-terminal domain |Escherichia coli [TaxId: 562]
d1su0b_ : (VAL30) (GLY100) [view usage] : d.224.1.2 |SufE/NifU |SufE/NifU |NifU/IscU domain |IscU homolog SPy0289 |Streptococcus pyogenes [TaxId: 1314]
d2j3wa_ : (VAL64) (LYS136) [view usage] : d.110.4.3 |Profilin-like |SNARE-like |Sedlin (SEDL) |Sedlin (SEDL) |Mouse (Mus musculus) [TaxId: 10090]
d1y00a_ : (VAL8) (GLU54) [view usage] : b.151.1.1 |CsrA-like |CsrA-like |CsrA-like |Carbon storage regulator homolog, CsrA |Escherichia coli [TaxId: 562]
d2nvub1 : (LEU2161) (LEU2235) [view usage] : c.111.1.2 |Activating enzymes of the ubiquitin-like proteins |Activating enzymes of the ubiquitin-like proteins |Ubiquitin activating enzymes (UBA) |UBA3 |Human (Homo sapiens) [TaxId: 9606]
d1h3qa_ : (VAL64) (LEU138) [view usage] : d.110.4.3 |Profilin-like |SNARE-like |Sedlin (SEDL) |Sedlin (SEDL) |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, d.92, d.129, c.23, b.60, d.127, d.110, c.111, d.54, d.4, d.224, d.34, i.18, b.151