Tableau information
Concept source: d3p7xb_ amino acid (a.a.) range (PHE23)(ALA83)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE23) (THR28) E1
(ASN35) (LEU39) E2
(LEU48) (PRO53) E3
(GLY58) (ASP70) H4
(GLU75) (ALA83) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -174.2° E2
E3 57.3° -121.5° E3
H4 -115.8° 65.8° -172.1° H4
E5 58.6° -118.7° -13.1° -168.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3zrea_ : (LYS26) (CYS82) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Yersinia pseudotuberculosis [TaxId: 502800]
d2ljaa_ : (ALA11) (CYS71) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bacteroides vulgatus [TaxId: 435590]
d3tmqa_ : (MET1) (SER55) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d4af2a_ : (SER23) (CYS82) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Escherichia coli [TaxId: 562]
d1cnea2 : (GLY125) (ARG176) [view usage] : c.25.1.1 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |Reductases |Nitrate reductase |Maize (Zea mays) [TaxId: 4577]
d1xm3c_ : (MSE3) (ALA43) [view usage] : c.1.31.1 |TIM beta/alpha-barrel |ThiG-like |ThiG-like |Thiazole biosynthesis protein ThiG |Bacillus subtilis [TaxId: 1423]
d1tv2a_ : (LYS100) (VAL160) [view usage] : c.1.25.1 |TIM beta/alpha-barrel |Monomethylamine methyltransferase MtmB |Monomethylamine methyltransferase MtmB |Monomethylamine methyltransferase MtmB |Methanosarcina barkeri [TaxId: 2208]
d2xpdc_ : (ASP23) (ILE83) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Yersinia pseudotuberculosis [TaxId: 502800]
d2nzma_ : (ASN185) (THR226) [view usage] : b.80.1.1 |Single-stranded right-handed beta-helix |Pectin lyase-like |Pectate lyase-like |automated matches |Bacillus subtilis [TaxId: 1423]
d3stgb_ : (MET1) (SER54) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |automated matches |Neisseria meningitidis [TaxId: 122586]
d3hvxa_ : (SER23) (SER82) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thiol peroxidase Tpx |Escherichia coli K-12 [TaxId: 83333]
d2xpdf_ : (LYS26) (CYS82) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Yersinia pseudotuberculosis [TaxId: 502800]
d4hdea_ : (THR39) (ASP102) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3hvva_ : (SER23) (ILE83) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thiol peroxidase Tpx |Escherichia coli K-12 [TaxId: 83333]
d1y25b_ : (SER22) (LYS83) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thiol peroxidase Tpx |Mycobacterium tuberculosis [TaxId: 1773]
d2wqpa1 : (ASN5) (VAL59) [view usage] : c.1.10.6 |TIM beta/alpha-barrel |Aldolase |NeuB-like |automated matches |Neisseria meningitidis [TaxId: 491]
d3kcmd_ : (PHE35) (ASP94) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Geobacter metallireducens [TaxId: 269799]
d3kcmb_ : (ASN30) (GLU95) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Geobacter metallireducens [TaxId: 269799]
d2xpdb_ : (ASP23) (CYS82) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Yersinia pseudotuberculosis [TaxId: 502800]
d3krga_ : (ASN185) (THR226) [view usage] : b.80.1.1 |Single-stranded right-handed beta-helix |Pectin lyase-like |Pectate lyase-like |automated matches |Bacillus subtilis [TaxId: 1423]
d2yzhd_ : (ARG24) (VAL83) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
d3or5a_ : (PRO36) (ASN97) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Chlorobaculum tepidum [TaxId: 1097]
d4ipia1 : (ASN5) (GLN55) [view usage] : c.1.10.6 |TIM beta/alpha-barrel |Aldolase |NeuB-like |automated matches |Neisseria meningitidis [TaxId: 487]
d2he3a_ : (ASP10) (PRO67) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4n6fb_ : (TRP14) (ASP56) [view usage] : c.1.31.0 |TIM beta/alpha-barrel |ThiG-like |automated matches |automated matches |Amycolatopsis orientalis [TaxId: 797057]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, c.1, c.47, c.25