Tableau information
Concept source: d4lhqa_ amino acid (a.a.) range (VAL70)(PHE117)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL70) (ASP75) E1
(VAL82) (GLY87) E2
(ASN88) (PHE93) E3
(ASN97) (PHE108) H4
(GLN112) (PHE117) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 156.8° E2
E3 -39.8° 161.7° E3
H4 142.8° -25.7° 161.6° H4
E5 -60.4° 141.2° -20.8° 149.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2c4ka1 : (GLY31) (ILE96) [view usage] : c.61.1.2 |PRTase-like |PRTase-like |Phosphoribosylpyrophosphate synthetase-like |PRPP synthetase-associated protein 1 |Human (Homo sapiens) [TaxId: 9606]
d1vlya2 : (ASP55) (PRO111) [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |Hypothetical protein YgfZ, N-terminal domain |Escherichia coli [TaxId: 562]
d1wrab_ : (TYR191) (PHE251) [view usage] : d.157.1.8 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Pce catalytic domain-like |Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1zbra1 : (HIS197) (PRO261) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Porphyromonas gingivalis [TaxId: 837]
d2i00b2 : (ARG213) (ILE272) [view usage] : d.108.1.10 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |EF1021-like |Putative acetyltransferase EF2353 |Enterococcus faecalis [TaxId: 1351]
d3b1ua3 : (ASP388) (TYR463) [view usage] : d.126.1.5 |Pentein, beta/alpha-propeller |Pentein |Peptidylarginine deiminase Pad4, catalytic C-terminal domain |Peptidylarginine deiminase Pad4, catalytic C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2ppye_ : (VAL4) (VAL62) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Geobacillus kaustophilus [TaxId: 235909]
d1l1qa_ : (CYS93) (LEU155) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Adenine PRTase |Giardia intestinalis [TaxId: 5741]
d2v0sa_ : (THR87) (MET143) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nrka2 : (ASP55) (PRO111) [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |Hypothetical protein YgfZ, N-terminal domain |Escherichia coli [TaxId: 562]
d3iava1 : (PHE67) (ASN139) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Streptomyces coelicolor [TaxId: 1902]
d4iqba_ : (ILE179) (GLY255) [view usage] : d.117.1.0 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1b02a_ : (HIS143) (ASP220) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Bacillus subtilis [TaxId: 1423]
d1vdmg_ : (ARG67) (LEU119) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Pprobable purine phosphoribosyltransferase PH0095 |Pyrococcus horikoshii [TaxId: 53953]
d2q9ub1 : (GLY16) (HIS85) [view usage] : d.157.1.3 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |ROO N-terminal domain-like |Nitric oxide reductase N-terminal domain |Giardia intestinalis [TaxId: 5741]
d2yz3a_ : (GLU151) (GLY219) [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Pseudomonas putida [TaxId: 303]
d1bkoa_ : (HIS143) (ASP220) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Bacillus subtilis [TaxId: 1423]
d4l1ya_ : (ASN102) (GLY170) [view usage] : d.151.1.2 |DNase I-like |DNase I-like |Inositol polyphosphate 5-phosphatase (IPP5) |automated matches |Bedbug (Cimex lectularius) [TaxId: 79782]
d3hvma_ : (PRO131) (SER190) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Helicobacter pylori J99 [TaxId: 85963]
d2cmua1 : (PRO133) (SER192) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Helicobacter pylori J99 [TaxId: 85963]
d3c1nb1 : (GLY185) (ASP231) [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d3srxb_ : (PRO179) (SER249) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d2a7sa1 : (SER71) (ILE149) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Propionyl-CoA carboxylase complex B subunit, PccB |Mycobacterium tuberculosis [TaxId: 1773]
d2l5pa_ : (ILE133) (THR194) [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1lrza2 : (GLU39) (PRO109) [view usage] : d.108.1.4 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |FemXAB nonribosomal peptidyltransferases |Methicillin resistance protein FemA |Staphylococcus aureus [TaxId: 1280]
d2biba2 : (TYR166) (PHE226) [view usage] : d.157.1.8 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Pce catalytic domain-like |Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2hv2a2 : (ASN199) (ASN257) [view usage] : d.108.1.10 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |EF1021-like |Hypothetical protein EF1021 |Enterococcus faecalis [TaxId: 1351]
d3t94a_ : (SER25) (ARG97) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d2b7bb1 : (ALA1145) (LEU1206) [view usage] : d.58.12.1 |Ferredoxin-like |eEF-1beta-like |eEF-1beta-like |Guanine nucleotide exchange factor (GEF) domain from elongation factor-1 beta |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1lcaa_ : (LEU180) (GLY256) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
d1wupb_ : (GLU131) (SER196) [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Serratia marcescens [TaxId: 615]
d4jota_ : (GLN-1) (GLY61) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Deinococcus radiodurans [TaxId: 243230]
d1jt1a_ : (THR185) (HIS263) [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]
d1wraa1 : (TYR191) (HIS253) [view usage] : d.157.1.8 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Pce catalytic domain-like |Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d4r4ya_ : (GLY55) (GLY106) [view usage] : d.153.1.5 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |(Glycosyl)asparaginase |Glycosylasparaginase (aspartylglucosaminidase, AGA) |Elizabethkingia miricola [TaxId: 172045]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.58, c.56, d.157, d.117, c.14, d.165, d.153, d.151, b.60, d.126, d.108, c.73, c.61, d.250