Protein Concepts Dictionary

Tableau information

Concept source:  d2xe3a_  amino acid (a.a.) range (ASP287)(PHE343)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP287)  (LEU292) E1
	  (TYR294)  (ASN304) E2
	  (ASN306)  (ASN316) E3
	  (ARG322)  (GLY328) H4
	  (ASP332)  (PHE343) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2       16.8°   E2                          
E3      155.2°  172.0°   E3                   
H4      -61.7°  -49.9° -134.8°   H4            
E5      -37.0°  -20.3°  167.7°   41.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2xe5a_ :   (ASP287)  (PHE343)   [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |automated matches |Escherichia coli [TaxId: 562]
 d2j1na_ :   (ASP290)  (PHE346)   [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |automated matches |Escherichia coli [TaxId: 562]
 d2xe1a_ :   (ASP298)  (PHE354)   [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |automated matches |Escherichia coli [TaxId: 562]
 d2xe2a_ :   (ASP287)  (PHE343)   [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |automated matches |Escherichia coli [TaxId: 562]
 d1osma_ :   (GLY287)  (PHE340)   [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |Porin |Klebsiella pneumoniae [TaxId: 573]
 d2xe3a_ :   (ASP287)  (PHE343)   [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |automated matches |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   f.4