Tableau information
Concept source: d1xsaa_ amino acid (a.a.) range (ILE14)(GLY80)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE14) (LEU20) E1
(ALA28) (ASP38) E2
(PRO46) (PRO52) E3
(ASP56) (GLY69) H4
(GLN74) (GLY80) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 140.2° E2
E3 142.5° 66.3° E3
H4 -63.3° 77.5° 136.5° H4
E5 104.7° -108.5° -79.6° 136.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4n1ua_ : (LEU6) (PHE74) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |7,8-dihydro-8-oxoguanine triphosphatase Hmth1 |Human (Homo sapiens) [TaxId: 9606]
d1jrkd_ : (VAL3) (PHE59) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Hypothetical protein PAE3301 |Pyrobaculum aerophilum [TaxId: 13773]
d1k2ea_ : (VAL3) (PHE59) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Hypothetical protein PAE3301 |Pyrobaculum aerophilum [TaxId: 13773]
d3q93a_ : (LEU6) (PHE74) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2duka_ : (LYS11) (LYS68) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2fb1a2 : (LEU13) (ILE84) [view usage] : d.113.1.6 |Nudix |Nudix |BT0354 N-terminal domain-like |Hypothetical protein BT0354, N-terminal domain |Bacteroides thetaiotaomicron [TaxId: 818]
d4hvya_ : (ASN41) (THR104) [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1se9a_ : (LEU8) (ALA61) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Hypothetical protein At3g01050 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d4n1ub_ : (GLY2) (PHE74) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |7,8-dihydro-8-oxoguanine triphosphatase Hmth1 |Human (Homo sapiens) [TaxId: 9606]
d4ilqa_ : (THR4) (ASN83) [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Chlamydia trachomatis [TaxId: 471472]
d3gg6a_ : (ASN41) (THR104) [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3hyqa_ : (HIS32) (ASP94) [view usage] : d.113.1.2 |Nudix |Nudix |IPP isomerase-like |Isopentenyl diphosphate isomerase |Salmonella enterica [TaxId: 99287]
d1krha3 : (SER2) (GLU54) [view usage] : d.15.4.2 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin domains from multidomain proteins |Benzoate dioxygenase reductase, N-terminal domain |Acinetobacter sp. [TaxId: 472]
d3a6ua_ : (LEU4) (GLU69) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Nucleoside triphosphate pyrophosphorylase (MutT) |Escherichia coli K-12 [TaxId: 83333]
d1f3ya_ : (VAL17) (TYR78) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) |Narrow-leaved blue lupine (Lupinus angustifolius) [TaxId: 3871]
d1jrkb_ : (VAL3) (PHE59) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Hypothetical protein PAE3301 |Pyrobaculum aerophilum [TaxId: 13773]
d1mqwa_ : (PHE43) (SER103) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |ADP-ribose pyrophosphatase |Mycobacterium tuberculosis [TaxId: 1773]
d1jrka_ : (VAL3) (PHE59) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Hypothetical protein PAE3301 |Pyrobaculum aerophilum [TaxId: 13773]
d1qqra_ : (LYS156) (GLU218) [view usage] : d.15.5.1 |beta-Grasp (ubiquitin-like) |Staphylokinase/streptokinase |Staphylokinase/streptokinase |Streptokinase |Streptococcus equisimilis [TaxId: 119602]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.15, d.113