Tableau information
Concept source: d3ozua2 amino acid (a.a.) range (GLN189)(SER258)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN189) (ILE195) E1
(LEU202) (ASP212) E2
(ARG217) (GLY227) E3
(VAL236) (ASP242) H4
(VAL250) (SER258) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 148.4° E2
E3 -67.1° 118.4° E3
H4 77.6° -71.7° -112.8° H4
E5 153.4° -57.4° 95.8° -128.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1gvha2 : (GLY186) (ASP251) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Flavohemoglobin, central domain |Escherichia coli [TaxId: 562]
d3ozua2 : (GLN189) (SER258) [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Ralstonia eutropha [TaxId: 381666]
d1ihma_ : (GLU1455) (PHE1503) [view usage] : b.121.4.3 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Caliciviridae-like VP |Calicivirus capsid protein |Norwalk virus [TaxId: 11983]
d1cqxa2 : (GLN189) (SER258) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Flavohemoglobin, central domain |Alcaligenes eutrophus [TaxId: 106590]
d1ndha1 : (HIS49) (GLY115) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |cytochrome b5 reductase |Pig (Sus scrofa), liver [TaxId: 9823]
d1vl7a_ : (GLN19) (VAL72) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Hypothetical protein Alr5027 |Nostoc sp. PCC 7120 [TaxId: 103690]
d1i7pa1 : (HIS77) (GLY143) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |cytochrome b5 reductase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2eixa1 : (MET86) (GLY142) [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Slime mold (Physarum polycephalum) [TaxId: 5791]
d1umka1 : (HIS77) (GLY143) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |cytochrome b5 reductase |Human (Homo sapiens) [TaxId: 9606]
d4k6ta_ : (ASN195) (ASN251) [view usage] : b.21.1.1 |Virus attachment protein globular domain |Virus attachment protein globular domain |Adenovirus fiber protein "knob" domain |Adenovirus fiber protein "knob" domain |Human adenovirus 37 [TaxId: 52275]
d3w2ea1 : (HIS49) (GLY115) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |cytochrome b5 reductase |Pig (Sus scrofa), liver [TaxId: 9823]
d1h7za_ : (ASN142) (ASP198) [view usage] : b.21.1.1 |Virus attachment protein globular domain |Virus attachment protein globular domain |Adenovirus fiber protein "knob" domain |Adenovirus fiber protein "knob" domain |Human adenovirus type 3 [TaxId: 45659]
d3w5ha1 : (HIS1049) (GLY1115) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |cytochrome b5 reductase |Pig (Sus scrofa), liver [TaxId: 9823]
d2piaa1 : (ALA43) (ASN103) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Phthalate dioxygenase reductase |Pseudomonas cepacia, db01 [TaxId: 292]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.121, b.45, b.21, b.43